RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 SP3Q02447 781 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 KLRC3Q07444 240 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 CASC1Q6TDU7 716 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 CATSPERGQ6ZRH7 1159 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 RASGRP2Q7LDG7 609 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 ANKRD13CQ8N6S4 541 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 DDX12PQ92771 950 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 MKL1Q969V6 931 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 CHMP4CQ96CF2 233 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 NUP88Q99567 741 aaPredicted RBP10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 RNF41Q9H4P4 317 aaPredicted RBP10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 SH2D4AQ9H788 454 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 PNMA3Q9UL41 463 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 STX8Q9UNK0 236 aa10.92□□□□□ -0.66
SPTAN1-218ENST00000629137 E7EWF7 191 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 SLC27A2O14975 620 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 NDUFB10O96000 172 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 NOVP48745 357 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 COL9A3Q14050 684 aaPredicted RBP10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 NECTIN1Q15223 517 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 RCSD1Q6JBY9 416 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 CYB5R4Q7L1T6 521 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 LPAR1Q92633 364 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 ESR2Q92731 530 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 ZBED2Q9BTP6 218 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 TANGO6Q9C0B7 1094 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 TXNRD2Q9NNW7 524 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 ZSWIM5Q9P217 1185 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 RLFQ13129 1914 aa10.91□□□□□ -0.66
SPTAN1-218ENST00000629137 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 WDR46O15213 610 aaKnown RBP10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 CNMDO75829 334 aa10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 LACTBP83111 547 aaPredicted RBP10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 CREB3L3Q68CJ9 461 aa10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 TMEM47Q9BQJ4 181 aa10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 KRT23Q9C075 422 aa10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 TCP11L1Q9NUJ3 509 aa10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 FBXO28Q9NVF7 368 aa10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 RBPJLQ9UBG7 517 aa10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 PARP14Q460N5 1801 aa10.9□□□□□ -0.66
SPTAN1-218ENST00000629137 A0A0G2JMZ2 1700 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 COL9A1P20849 921 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 FAM110CQ1W6H9 321 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 Q3C1V9 767 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 CHST3Q7LGC8 479 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 CTU1Q7Z7A3 348 aaKnown RBP10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 ERO1AQ96HE7 468 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 ZSCAN10Q96SZ4 725 aaPredicted RBP10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 SLC4A5Q9BY07 1137 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 CNNM2Q9H8M5 875 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 BTBD7Q9P203 1132 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 MTMR7Q9Y216 660 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 TRIM17Q9Y577 477 aa10.89□□□□□ -0.67
SPTAN1-218ENST00000629137 TNKSO95271 1327 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 FLOT1O75955 427 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 MCCP23508 829 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 PSMC4P43686 418 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 GCLCP48506 637 aaPredicted RBP10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 ANTXR2P58335 489 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 COG2Q14746 738 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 SLFN13Q68D06 897 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 OTOP1Q7RTM1 612 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 MB21D2Q8IYB1 491 aaPredicted RBP10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 ENAHQ8N8S7 591 aaPredicted RBP10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 NCOA7Q8NI08 942 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 ATG4CQ96DT6 458 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 EPAS1Q99814 870 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 MCOLN1Q9GZU1 580 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 SENP2Q9HC62 589 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 MORF4L1Q9UBU8 362 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 SYNPO2Q9UMS6 1093 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
SPTAN1-218ENST00000629137 MGAMO43451 1857 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 TOP1P11387 765 aaKnown RBP10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 BMP3P12645 472 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 ERVK-9P63128 1117 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 ERVK-24P63145 666 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 TRDNQ13061 729 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 SEC23AQ15436 765 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 LBX2Q6XYB7 198 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 KCTD1Q719H9 257 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 RALYLQ86SE5 291 aaKnown RBP10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 IQCA1Q86XH1 822 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 GMCL1Q96IK5 515 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 TTC14Q96N46 770 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 PORCNQ9H237 461 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 EFCC1Q9HA90 598 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 PPP1R9AQ9ULJ8 1098 aa10.87□□□□□ -0.67
SPTAN1-218ENST00000629137 COL11A1P12107 1806 aaPredicted RBP10.86□□□□□ -0.67
SPTAN1-218ENST00000629137 BRCA2P51587 3418 aa10.86□□□□□ -0.67
SPTAN1-218ENST00000629137 PPP1R3GB7ZBB8 358 aa10.86□□□□□ -0.67
SPTAN1-218ENST00000629137 TMEM232C9JQI7 657 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms