RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 PI4KBQ9UBF8 816 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 SAP30BPQ9UHR5 308 aaKnown RBP7.86□□□□□ -1.15
BRCC3-209ENST00000620502 DOCK1Q14185 1865 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 NAV1Q8NEY1 1877 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 ATAD5Q96QE3 1844 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 MANSC4A6NHS7 340 aaPredicted RBP7.85□□□□□ -1.15
BRCC3-209ENST00000620502 CTNND1O60716 968 aaKnown RBP7.85□□□□□ -1.15
BRCC3-209ENST00000620502 TRPA1O75762 1119 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 MBD4O95243 580 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 USP5P45974 858 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 CTCFP49711 727 aaPredicted RBP7.85□□□□□ -1.15
BRCC3-209ENST00000620502 INHBEP58166 350 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 JAG1P78504 1218 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 PPATQ06203 517 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 TRIM46Q7Z4K8 759 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 SCYL3Q8IZE3 742 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 SDR42E1Q8WUS8 393 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 OSBP2Q969R2 916 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 STRBPQ96SI9 672 aaKnown RBP7.85□□□□□ -1.15
BRCC3-209ENST00000620502 PTPN18Q99952 460 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 CRNKL1Q9BZJ0 848 aaKnown RBP7.85□□□□□ -1.15
BRCC3-209ENST00000620502 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.85□□□□□ -1.15
BRCC3-209ENST00000620502 SAGE1Q9NXZ1 904 aa7.85□□□□□ -1.15
BRCC3-209ENST00000620502 HERC5Q9UII4 1024 aaKnown RBP7.85□□□□□ -1.15
BRCC3-209ENST00000620502 ERVH48-1M5A8F1 160 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 IGF2BP3O00425 579 aaKnown RBP eCLIP7.84□□□□□ -1.15
BRCC3-209ENST00000620502 CA12O43570 354 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 RAD21O60216 631 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 ZFYP08048 801 aaPredicted RBP7.84□□□□□ -1.15
BRCC3-209ENST00000620502 BMP1P13497 986 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 PTPRAP18433 802 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 CAP2P40123 477 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 PLCD1P51178 756 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 LBX1P52954 281 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 SREBF2Q12772 1141 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 PPIL2Q13356 520 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 SLC4A8Q2Y0W8 1093 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 COL13A1Q5TAT6 717 aaPredicted RBP7.84□□□□□ -1.15
BRCC3-209ENST00000620502 TATDN1Q6P1N9 297 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 BRI3BPQ8WY22 251 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 APPBP2Q92624 585 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 EVI5LQ96CN4 794 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 EHD4Q9H223 541 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 DCP1AQ9NPI6 582 aaPredicted RBP7.84□□□□□ -1.15
BRCC3-209ENST00000620502 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.84□□□□□ -1.15
BRCC3-209ENST00000620502 GMPR2Q9P2T1 348 aaKnown RBP7.84□□□□□ -1.15
BRCC3-209ENST00000620502 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
BRCC3-209ENST00000620502 BAZ2AQ9UIF9 1905 aaKnown RBP7.84□□□□□ -1.16
BRCC3-209ENST00000620502 CCL15-CCL14A0A0B4J2E2 113 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 GSG1L2A8MUP6 293 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 SMIM22K7EJ46 135 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 M0R2C6 588 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 TBC1D8O95759 1140 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 HLA-DOAP06340 250 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 CYP2D6P10635 497 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 GTF2A2P52657 109 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 RAB15P59190 212 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 GABPAQ06546 454 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 MOGSQ13724 837 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 CCL15Q16663 113 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 SHROOM1Q2M3G4 852 aaPredicted RBP7.83□□□□□ -1.16
BRCC3-209ENST00000620502 ZMYM1Q5SVZ6 1142 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 ZNF787Q6DD87 383 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 Q6ZVU0 165 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 TTC6Q86TZ1 520 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 MEIOBQ8N635 442 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 SEC62Q99442 399 aaKnown RBP7.83□□□□□ -1.16
BRCC3-209ENST00000620502 FSD1Q9BTV5 496 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 CFHR5Q9BXR6 569 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 R3HDMLQ9H3Y0 253 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 PRDM10Q9NQV6 1147 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 TMPRSS4Q9NRS4 437 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 ATP8A2Q9NTI2 1148 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 MCM9Q9NXL9 1143 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 SERPINB13Q9UIV8 391 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 AFG3L2Q9Y4W6 797 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 SLC4A4Q9Y6R1 1079 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 ZHX2Q9Y6X8 837 aa7.83□□□□□ -1.16
BRCC3-209ENST00000620502 PTPRFP10586 1907 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 USP17L12C9JPN9 530 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 USP17L21D6R901 530 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 CXCL11O14625 94 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 GPAA1O43292 621 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 POLR3DP05423 398 aaPredicted RBP7.82□□□□□ -1.16
BRCC3-209ENST00000620502 CETPP11597 493 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 SHMT1P34896 483 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 SNAPC2Q13487 334 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 LRRFIP1Q32MZ4 808 aaKnown RBP7.82□□□□□ -1.16
BRCC3-209ENST00000620502 C12orf60Q5U649 245 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 MRPL14Q6P1L8 145 aaKnown RBP7.82□□□□□ -1.16
BRCC3-209ENST00000620502 CTR9Q6PD62 1173 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 CCDC84Q86UT8 332 aaPredicted RBP7.82□□□□□ -1.16
BRCC3-209ENST00000620502 TICAM2Q86XR7 235 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 FAM43AQ8N2R8 423 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 CRACR2BQ8N4Y2 399 aaPredicted RBP7.82□□□□□ -1.16
BRCC3-209ENST00000620502 PICK1Q9NRD5 415 aa7.82□□□□□ -1.16
BRCC3-209ENST00000620502 CYP2D7A0A087X1C5 515 aa7.81□□□□□ -1.16
BRCC3-209ENST00000620502 PATL2C9JE40 543 aaKnown RBP7.81□□□□□ -1.16
BRCC3-209ENST00000620502 BTBD19C9JJ37 291 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms