RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TAL1P17542 331 aaPredicted RBP6.15□□□□□ -1.42
SHMT1-211ENST00000618902 GRK4P32298 578 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 OAZ1P54368 228 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 KLRC3Q07444 240 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 SKOR2Q2VWA4 1001 aaPredicted RBP6.15□□□□□ -1.42
SHMT1-211ENST00000618902 FAM83BQ5T0W9 1011 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 SLFN13Q68D06 897 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 TTBK2Q6IQ55 1244 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 CASC1Q6TDU7 716 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 CCAR1Q8IX12 1150 aaKnown RBP6.15□□□□□ -1.42
SHMT1-211ENST00000618902 MSL3Q8N5Y2 521 aaKnown RBP6.15□□□□□ -1.42
SHMT1-211ENST00000618902 ANKLE1Q8NAG6 615 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 GMCL1P1Q8NEA9 526 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 REPS2Q8NFH8 660 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 CD99L2Q8TCZ2 262 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 ESR2Q92731 530 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 ZSCAN10Q96SZ4 725 aaPredicted RBP6.15□□□□□ -1.42
SHMT1-211ENST00000618902 ARHGAP39Q9C0H5 1083 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 CPVLQ9H3G5 476 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 MROH8Q9H579 483 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 NRBP1Q9UHY1 535 aa6.15□□□□□ -1.42
SHMT1-211ENST00000618902 TNKSO95271 1327 aa6.15□□□□□ -1.43
SHMT1-211ENST00000618902 PARP14Q460N5 1801 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 LOC102724159A0A0B4J2E5 919 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 SPDYE16A6NNV3 312 aaPredicted RBP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 SH2B2O14492 632 aaPredicted RBP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 PRC1O43663 620 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 MSCO60682 206 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 REC8O95072 547 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 GJB1P08034 283 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 SNHG28P0DPA3 235 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 TOP1P11387 765 aaKnown RBP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 MCCP23508 829 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 RBM25P49756 843 aaKnown RBP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 ERVK-9P63128 1117 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 ERVK-24P63145 666 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 PWP2Q15269 919 aaKnown RBP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 Q3C1V9 767 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 KCTD1Q719H9 257 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 PRPF38AQ8NAV1 312 aaKnown RBP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 NCOA7Q8NI08 942 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 ATG4CQ96DT6 458 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 IL17RAQ96F46 866 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 GMCL1Q96IK5 515 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 JAKMIP1Q96N16 626 aaKnown RBP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 NEK1Q96PY6 1258 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 KIF2CQ99661 725 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 NUDT12Q9BQG2 462 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 MTA3Q9BTC8 594 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 C22orf23Q9BZE7 217 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 KRT23Q9C075 422 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 CNNM2Q9H8M5 875 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 LY9Q9HBG7 655 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 CHMP5Q9NZZ3 219 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 BTBD7Q9P203 1132 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 RBPJLQ9UBG7 517 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 ADAMTS5Q9UNA0 930 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 STX8Q9UNK0 236 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 MTMR7Q9Y216 660 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 DIS3Q9Y2L1 958 aaKnown RBP6.14□□□□□ -1.43
SHMT1-211ENST00000618902 A0A0C4DFX4 3053 aa6.14□□□□□ -1.43
SHMT1-211ENST00000618902 SLC15A5A6NIM6 579 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 DDX11L8A8MPP1 907 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 IFIT3O14879 490 aaKnown RBP6.13□□□□□ -1.43
SHMT1-211ENST00000618902 EPB41L2O43491 1005 aaKnown RBP6.13□□□□□ -1.43
SHMT1-211ENST00000618902 ECM2O94769 699 aaPredicted RBP6.13□□□□□ -1.43
SHMT1-211ENST00000618902 HMGCRP04035 888 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 GOLGA8HP0CJ92 632 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 PDHBP11177 359 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 DSG3P32926 999 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 RGS2P41220 211 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 GJA8P48165 433 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 VASPP50552 380 aaPredicted RBP6.13□□□□□ -1.43
SHMT1-211ENST00000618902 SNAP25P60880 206 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 ZNF543Q08ER8 600 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 TRAF1Q13077 416 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 MKRN4PQ13434 485 aaPredicted RBP6.13□□□□□ -1.43
SHMT1-211ENST00000618902 TMEM67Q5HYA8 995 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 PLEKHH3Q7Z736 793 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 RALYLQ86SE5 291 aaKnown RBP6.13□□□□□ -1.43
SHMT1-211ENST00000618902 FAM160B2Q86V87 743 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 DGKHQ86XP1 1220 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 RAB11FIP4Q86YS3 637 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 TEX2Q8IWB9 1127 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 STAG2Q8N3U4 1231 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 ANKRD13CQ8N6S4 541 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 PNMA1Q8ND90 353 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 CHURC1Q8WUH1 139 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 MYL10Q9BUA6 226 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 UPF3BQ9BZI7 483 aaKnown RBP6.13□□□□□ -1.43
SHMT1-211ENST00000618902 PORCNQ9H237 461 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 ZSWIM6Q9HCJ5 1215 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 FBXO40Q9UH90 709 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 FEM1BQ9UK73 627 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 BRPF3Q9ULD4 1205 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 PPP1R9AQ9ULJ8 1098 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 IVNS1ABPQ9Y6Y0 642 aa6.13□□□□□ -1.43
SHMT1-211ENST00000618902 RBBP6Q7Z6E9 1792 aaKnown RBP6.13□□□□□ -1.43
SHMT1-211ENST00000618902 A0A0G2JMZ2 1700 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms