RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 EZRP15311 586 aaKnown RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 SARSP49591 514 aaKnown RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 PSEN1P49768 467 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 PROSER2Q86WR7 435 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 C2CD5Q86YS7 1000 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 AMOTL1Q8IY63 956 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 PROCA1Q8NCQ7 364 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 RNPC3Q96LT9 517 aaKnown RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 GSDMAQ96QA5 445 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 KLC4Q9NSK0 619 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 DONSONQ9NYP3 566 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 ZSCAN5CA6NGD5 496 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 PRKAB2O43741 272 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 DEXIO95424 95 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 GCP02774 474 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 TATP17735 454 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 NLRP5P59047 1200 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 HERVK_113P62684 666 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 HDLBPQ00341 1268 aaKnown RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 CCDC178Q5BJE1 867 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 LRCH2Q5VUJ6 765 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 PIK3AP1Q6ZUJ8 805 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 MAGEB6Q8N7X4 407 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 SPDYE1Q8NFV5 336 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 MS4A14Q96JA4 679 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 ZIM3Q96PE6 472 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 IFIH1Q9BYX4 1025 aaKnown RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 NHEJ1Q9H9Q4 299 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 LY9Q9HBG7 655 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 PEAK1Q9H792 1746 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 SNAP23O00161 211 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 HGSO14964 777 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 FOXP2O15409 715 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 FMNL1O95466 1100 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 CPP00450 1065 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 ELF1P32519 619 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 PRCPP42785 496 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 TRIM14Q14142 442 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 APTXQ7Z2E3 356 aaKnown RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 PNMA8AQ86V59 439 aaPredicted RBP7.44□□□□□ -1.22
LMO3-235ENST00000616247 IQCA1Q86XH1 822 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 CSGALNACT2Q8N6G5 542 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 SPATA4Q8NEY3 305 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 RPGRIP1Q96KN7 1286 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 ALS2CR12Q96Q35 445 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 SMIM23A6NLE4 172 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 EIF4E1BA6NMX2 242 aaKnown RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 PLEKP08567 350 aaPredicted RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 PDHBP11177 359 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 NR1D1P20393 614 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 LSP1P33241 339 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 KRT2P35908 639 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 FOXO4P98177 505 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 NTRK3Q16288 839 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 RABL6Q3YEC7 729 aaPredicted RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 TTC38Q5R3I4 469 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 CDKAL1Q5VV42 579 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 CPLX4Q7Z7G2 160 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 SYNE4Q8N205 404 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 MB21D1Q8N884 522 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 KCNH5Q8NCM2 988 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 PLBD2Q8NHP8 589 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 PLCD4Q9BRC7 762 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 SLC52A2Q9HAB3 445 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 STRN4Q9NRL3 753 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 ABCF2Q9UG63 623 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 PSMD14O00487 310 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 PSMA7O14818 248 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 HEXIM1O94992 359 aaKnown RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 IFNAR1P17181 557 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 PAX7P23759 505 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 MAGEA1P43355 309 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 CARSP49589 748 aaKnown RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 TTMPQ5BVD1 217 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 EARS2Q5JPH6 523 aaKnown RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 NAA35Q5VZE5 725 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 CACNA2D4Q7Z3S7 1137 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 IGDCC4Q8TDY8 1250 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 ZNF473Q8WTR7 871 aaKnown RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 CCT8L2Q96SF2 557 aa7.43□□□□□ -1.22
LMO3-235ENST00000616247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.43□□□□□ -1.22
LMO3-235ENST00000616247 NOC4LQ9BVI4 516 aaKnown RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 FAM217BQ9NTX9 383 aaPredicted RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 BAZ2BQ9UIF8 2168 aaKnown RBP7.43□□□□□ -1.22
LMO3-235ENST00000616247 ANKARQ7Z5J8 1434 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 NUTM2BA6NNL0 878 aaPredicted RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 NUTM2EB1AL46 878 aaPredicted RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 RPN1P04843 607 aaKnown RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 UBA7P41226 1012 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 MCAMP43121 646 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 EPHB4P54760 987 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 SNCBQ16143 134 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 ZNF654Q8IZM8 581 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 FANCBQ8NB91 859 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 OR2W6PQ8NHA6 318 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 ZKSCAN4Q969J2 545 aaPredicted RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 KRT12Q99456 494 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 NACAP1Q9BZK3 213 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 FOXP1Q9H334 677 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms