RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 VPS54Q9P1Q0 977 aa19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 TMEM63CQ9P1W3 806 aa19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 ARMCX3Q9UH62 379 aaPredicted RBP19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 H0YIN7 160 aa19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 HIP1RO75146 1068 aa19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 OR52Z1P0C646 297 aa19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 DEPTORQ8TB45 409 aa19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 EIF3CLB5ME19 914 aaKnown RBP19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 EIF3CQ99613 913 aaKnown RBP19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 PPP2R2CQ9Y2T4 447 aa19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 MRPL11Q9Y3B7 192 aaKnown RBP19.13■□□□□ 0.65
HMGXB3-206ENST00000613459 PALM2Q8IXS6 379 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 RNF168Q8IYW5 571 aaPredicted RBP19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 HVCN1Q96D96 273 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 KDM5DQ9BY66 1539 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 CTSWP56202 376 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 ZBTB8OSQ8IWT0 167 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 ATF7P17544 494 aaPredicted RBP19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 TRAPPC10P48553 1259 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 ETF1P62495 437 aaKnown RBP19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 SATB1Q01826 763 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 PSMD6Q15008 389 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 MYCBPQ99417 103 aaPredicted RBP19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 STK38LQ9Y2H1 464 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 NEK8Q86SG6 692 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 KRT12Q99456 494 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 COL4A3BPQ9Y5P4 624 aa19.12■□□□□ 0.65
HMGXB3-206ENST00000613459 MCF2L2Q86YR7 1114 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 GSDMBQ8TAX9 411 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 DDX27Q96GQ7 796 aaKnown RBP19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 MYL10Q9BUA6 226 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 KRIT1O00522 736 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 TNNI1P19237 187 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 TNFAIP1Q13829 316 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 CASC4Q6P4E1 433 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 FAM81BQ96LP2 452 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 RILPQ96NA2 401 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 BLZF1Q9H2G9 400 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 RIPOR2Q9Y4F9 1068 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 TTC36A6NLP5 189 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 KLHDC4Q8TBB5 520 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 GPR108Q9NPR9 543 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 SLC5A4Q9NY91 659 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 GOLGA8QA0A0J9YX86 632 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 GOLGA8OA6NCC3 632 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 GOLGA8NF8WBI6 632 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 PFDN6O15212 129 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 CFBP00751 764 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 POLR2BP30876 1174 aaKnown RBP19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 LMNB2Q03252 620 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 FANCBQ8NB91 859 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 ZNF277Q9NRM2 450 aaPredicted RBP19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 C1orf112Q9NSG2 853 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 CD2APQ9Y5K6 639 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 STMN1P16949 149 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 TRMT44Q8IYL2 757 aaKnown RBP19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 CSRNP1Q96S65 589 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 HAUS8Q9BT25 410 aa19.11■□□□□ 0.65
HMGXB3-206ENST00000613459 PLEKHG3A1L390 1219 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 FOSP01100 380 aaPredicted RBP19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 IRX5P78411 483 aaPredicted RBP19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 GCKP35557 465 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 SNCBQ16143 134 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 ANKRD42Q8N9B4 389 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 TBC1D7Q9P0N9 293 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 PTPRTO14522 1441 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 HGSO14964 777 aaPredicted RBP19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 TNNC2P02585 160 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 SCG2P13521 617 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 PDE6CP51160 858 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 BPIFB4P59827 614 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 MAPKAPK5Q8IW41 473 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 TGFBRAP1Q8WUH2 860 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 MTMR6Q9Y217 621 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 AFG3L2Q9Y4W6 797 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 GABPAQ06546 454 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 CCDC13Q8IYE1 715 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 IFNL3Q8IZI9 196 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 PSMB7Q99436 277 aa19.1■□□□□ 0.65
HMGXB3-206ENST00000613459 H2AFZP0C0S5 128 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 ADKP55263 362 aaKnown RBP19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 ARHGAP44Q17R89 818 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 H2AFVQ71UI9 128 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 NLRC4Q9NPP4 1024 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 STAM2O75886 525 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 KRT19P08727 400 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 RETREG2Q8NC44 543 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 TRIM11Q96F44 468 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 LARSQ9P2J5 1176 aaKnown RBP19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 ABCD1P33897 745 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 LRRC8AQ8IWT6 810 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 TPH2Q8IWU9 490 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 MGARPQ8TDB4 240 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 DDX39AO00148 427 aaKnown RBP19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 ATP2B4P23634 1241 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 GUCY2FP51841 1108 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 NSMFQ6X4W1 530 aa19.09■□□□□ 0.65
HMGXB3-206ENST00000613459 PANK4Q9NVE7 773 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms