RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 IFIH1Q9BYX4 1025 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 CCDC113Q9H0I3 377 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 RASSF4Q9H2L5 321 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 GOPCQ9HD26 462 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 LRWD1Q9UFC0 647 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 MARF1Q9Y4F3 1742 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 SMCO2A6NFE2 343 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 ATP2C2O75185 946 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 GSTO1P78417 241 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 WHAMMP3Q1A5X7 153 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 ERFEQ4G0M1 354 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 FAM76AQ8TAV0 307 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 TUBGCP2Q9BSJ2 902 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 KLRF2D3W0D1 207 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 CSF1RP07333 972 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 TUBBP07437 444 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 CYP19A1P11511 503 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 CXCR5P32302 372 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 USP8P40818 1118 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 TUBB4BP68371 445 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 SNX29Q8TEQ0 813 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 ATRIPQ8WXE1 791 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 PANX2Q96RD6 677 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 PARP3Q9Y6F1 533 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 SLIT1O75093 1534 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 XRN1Q8IZH2 1706 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 USP17L3A6NCW0 530 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 USP17L4A6NCW7 530 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 PRPF3O43395 683 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 BUB1O43683 1085 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 PRDX5P30044 214 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 FXR1P51114 621 aaKnown RBP eCLIP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 IFFO1Q0D2I5 559 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 TUBB2AQ13885 445 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 RAD9BQ6WBX8 426 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 USP17L1Q7RTZ2 530 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 TUBB2BQ9BVA1 445 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 HAUS4Q9H6D7 363 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 ADAM21Q9UKJ8 722 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 MEGF6O75095 1541 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 WDR19Q8NEZ3 1342 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 ARHGAP23Q9P227 1491 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 GOLGA6CA6NDK9 693 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 GOLGA6BA6NDN3 693 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 ERLIN2O94905 339 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 NDUFA10O95299 355 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 GOLGA6DP0CG33 693 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 DNM2P50570 870 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 VAV2P52735 878 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 ST5P78524 1137 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 DIXDC1Q155Q3 683 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 TTC19Q6DKK2 380 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 CNNM4Q6P4Q7 775 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 REXO1L1PQ8IX06 675 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 ANKRD2Q9GZV1 360 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 GOLGA6AQ9NYA3 693 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 HDAC6Q9UBN7 1215 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 CTDP1Q9Y5B0 961 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 FRMPD2Q68DX3 1309 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 C1orf167Q5SNV9 1468 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 CHD2O14647 1828 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 EBAG9O00559 213 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 RDXP35241 583 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 PRCPP42785 496 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 TOB1P50616 345 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 ALX1Q15699 326 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 TCP11X2Q5H9J9 407 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 C8orf74Q6P047 294 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 VPS36Q86VN1 386 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 PLCD3Q8N3E9 789 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 CHP1Q99653 195 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 L2HGDHQ9H9P8 463 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 MRFAP1Q9Y605 127 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 STK36Q9NRP7 1315 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 SALL1Q9NSC2 1324 aa7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 BAZ2BQ9UIF8 2168 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-206ENST00000610556 DDAH1O94760 285 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 MECOMQ03112 1051 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 LRRC41Q15345 812 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 DCAF17Q5H9S7 520 aaPredicted RBP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 ZNF658Q5TYW1 1059 aaPredicted RBP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 TMTC3Q6ZXV5 915 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 ZNF804AQ7Z570 1209 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 TICAM2Q86XR7 235 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 REXO1Q8N1G1 1221 aaKnown RBP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 ZNF579Q8NAF0 562 aaKnown RBP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 CNOT6LQ96LI5 555 aaKnown RBP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 FAM204AQ9H8W3 233 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 SUGCTQ9HAC7 445 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 RTCBQ9Y3I0 505 aaKnown RBP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 TOPAZ1Q8N9V7 1692 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 UFL1O94874 794 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 LONP1P36776 959 aaKnown RBP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 SF3A3Q12874 501 aaKnown RBP eCLIP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 UBE4AQ14139 1066 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 CASP8Q14790 479 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 CALCRLQ16602 461 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 HERC4Q5GLZ8 1057 aaPredicted RBP7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 CFAP58Q5T655 872 aa7.65□□□□□ -1.18
SYNPO2-206ENST00000610556 KLHL7Q8IXQ5 586 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms