RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 KCTD16Q68DU8 428 aa14.35□□□□□ -0.11
USP6NL-205ENST00000609104 PFKFB1P16118 471 aa14.35□□□□□ -0.11
USP6NL-205ENST00000609104 MAPKAPK5Q8IW41 473 aa14.35□□□□□ -0.11
USP6NL-205ENST00000609104 SLC8A1P32418 973 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
USP6NL-205ENST00000609104 PPP2R5AQ15172 486 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 AOX1Q06278 1338 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 TRIM35Q9UPQ4 493 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 TNRQ92752 1358 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 TMTC4Q5T4D3 741 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 HAUS1Q96CS2 278 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 LRGUKQ96M69 825 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 PCDHA12Q9UN75 941 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 CCT5P48643 541 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 PRKG1Q13976 671 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 RAPH1Q70E73 1250 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 POLD1P28340 1107 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 MORC4Q8TE76 937 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 HAUS8Q9BT25 410 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 ZMYM4Q5VZL5 1548 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 ZFYVE9O95405 1425 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 M0QZ92 97 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 OATP04181 439 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 CASP2P42575 452 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 ECE1P42892 770 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 SDCCAG3Q96C92 435 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 SUCLG2Q96I99 432 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 TRIM4Q9C037 500 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 FAF1Q9UNN5 650 aaPredicted RBP14.34□□□□□ -0.11
USP6NL-205ENST00000609104 ATF2P15336 505 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 HOXC9P31274 260 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 JADE1Q6IE81 842 aa14.34□□□□□ -0.11
USP6NL-205ENST00000609104 IVNS1ABPQ9Y6Y0 642 aa14.33□□□□□ -0.11
USP6NL-205ENST00000609104 NPATQ14207 1427 aa14.33□□□□□ -0.11
USP6NL-205ENST00000609104 PDE6CP51160 858 aa14.33□□□□□ -0.11
USP6NL-205ENST00000609104 IFRD2Q12894 506 aaPredicted RBP14.33□□□□□ -0.11
USP6NL-205ENST00000609104 DEPTORQ8TB45 409 aa14.33□□□□□ -0.11
USP6NL-205ENST00000609104 PDE11AQ9HCR9 933 aa14.33□□□□□ -0.11
USP6NL-205ENST00000609104 PPP1R9AQ9ULJ8 1098 aa14.33□□□□□ -0.11
USP6NL-205ENST00000609104 DUOX2Q9NRD8 1548 aa14.33□□□□□ -0.11
USP6NL-205ENST00000609104 BAG5Q9UL15 447 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 DENND4BO75064 1496 aaPredicted RBP14.33□□□□□ -0.12
USP6NL-205ENST00000609104 YWHAEP62258 255 aaKnown RBP14.33□□□□□ -0.12
USP6NL-205ENST00000609104 NCAPGQ9BPX3 1015 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 NLRX1Q86UT6 975 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 LPIN2Q92539 896 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 ARHGEF16Q5VV41 709 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 CCDC24Q8N4L8 307 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 SMYD2Q9NRG4 433 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 PRAG1Q86YV5 1406 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 IQCDQ96DY2 449 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 COBLO75128 1261 aa14.33□□□□□ -0.12
USP6NL-205ENST00000609104 SKA2Q8WVK7 121 aaPredicted RBP14.33□□□□□ -0.12
USP6NL-205ENST00000609104 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 SBNO1A3KN83 1393 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 IFT88Q13099 833 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 PPP2R5BQ15173 497 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 SPATS2Q86XZ4 545 aaKnown RBP14.32□□□□□ -0.12
USP6NL-205ENST00000609104 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP6NL-205ENST00000609104 HDAC11Q96DB2 347 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 FANCLQ9NW38 375 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 LIG4P49917 911 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 RCN2Q14257 317 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 TEKT1Q969V4 418 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 SGK1O00141 431 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 PPP2R5EQ16537 467 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 RAPGEF6Q8TEU7 1601 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 YTHDC2Q9H6S0 1430 aaKnown RBP14.32□□□□□ -0.12
USP6NL-205ENST00000609104 NDUFA8P51970 172 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 NSMFQ6X4W1 530 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 GOLGA5Q8TBA6 731 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 LRCH2Q5VUJ6 765 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 DLATP10515 647 aaKnown RBP14.32□□□□□ -0.12
USP6NL-205ENST00000609104 POMGNT1Q8WZA1 660 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 ZNF277Q9NRM2 450 aaPredicted RBP14.32□□□□□ -0.12
USP6NL-205ENST00000609104 ZNF148Q9UQR1 794 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 BZW2Q9Y6E2 419 aaKnown RBP14.32□□□□□ -0.12
USP6NL-205ENST00000609104 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 LRRD1A4D1F6 860 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 RASSF7Q02833 373 aa14.32□□□□□ -0.12
USP6NL-205ENST00000609104 PHEXP78562 749 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 TESPA1A2RU30 521 aaPredicted RBP14.31□□□□□ -0.12
USP6NL-205ENST00000609104 LUC7L3O95232 432 aaKnown RBP14.31□□□□□ -0.12
USP6NL-205ENST00000609104 KIF11P52732 1056 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 CLIC6Q96NY7 704 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 APOEP02649 317 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 GCP02774 474 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 A1BGP04217 495 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 RPN1P04843 607 aaKnown RBP14.31□□□□□ -0.12
USP6NL-205ENST00000609104 CARD14Q9BXL6 1004 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 SLC39A2Q9NP94 309 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 RPAINQ86UA6 219 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 ZNF654Q8IZM8 581 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 NME8Q8N427 588 aa14.31□□□□□ -0.12
USP6NL-205ENST00000609104 SUDS3Q9H7L9 328 aaPredicted RBP14.31□□□□□ -0.12
USP6NL-205ENST00000609104 K7ENM7 598 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms