RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
LINC00397-202ENST00000606785 CNNM4Q6P4Q7 775 aa6.99□□□□□ -1.29
LINC00397-202ENST00000606785 TRIM59Q8IWR1 403 aa6.99□□□□□ -1.29
LINC00397-202ENST00000606785 ARHGEF39Q8N4T4 335 aa6.99□□□□□ -1.29
LINC00397-202ENST00000606785 AFAP1L2Q8N4X5 818 aa6.99□□□□□ -1.29
LINC00397-202ENST00000606785 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
LINC00397-202ENST00000606785 C6orf222P0C671 652 aaPredicted RBP6.98□□□□□ -1.29
LINC00397-202ENST00000606785 LRP8Q14114 963 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 PRSS36Q5K4E3 855 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 WWC2Q6AWC2 1192 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 LETMD1Q6P1Q0 360 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 PPM1KQ8N3J5 372 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 ADCY4Q8NFM4 1077 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 DDX1Q92499 740 aaKnown RBP6.98□□□□□ -1.29
LINC00397-202ENST00000606785 ASPNQ9BXN1 380 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 TRIM39Q9HCM9 518 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
LINC00397-202ENST00000606785 PCDHB12Q9Y5F1 795 aa6.98□□□□□ -1.29
LINC00397-202ENST00000606785 DLX3O60479 287 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 EFCAB14O75071 495 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 DNAJC8O75937 253 aaPredicted RBP6.97□□□□□ -1.29
LINC00397-202ENST00000606785 APBA3O96018 575 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 ELNP15502 786 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 GABREP78334 506 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 TRIM28Q13263 835 aaKnown RBP6.97□□□□□ -1.29
LINC00397-202ENST00000606785 PRRT3Q5FWE3 981 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 AHI1Q8N157 1196 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 TMEM130Q8N3G9 435 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 SLC7A14Q8TBB6 771 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 RNF141Q8WVD5 230 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 BTN2A2Q8WVV5 523 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 MIPEPQ99797 713 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 ACSS3Q9H6R3 686 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 NDOR1Q9UHB4 597 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 FAN1Q9Y2M0 1017 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 FHOD1Q9Y613 1164 aa6.97□□□□□ -1.29
LINC00397-202ENST00000606785 FAM83GA6ND36 823 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 F8W735 103 aaPredicted RBP6.96□□□□□ -1.3
LINC00397-202ENST00000606785 CPEP16870 476 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 POU3F2P20265 443 aaPredicted RBP6.96□□□□□ -1.3
LINC00397-202ENST00000606785 ETV3P41162 512 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 ZNF445P59923 1031 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 NBPF9Q3BBW0 867 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 NOL9Q5SY16 702 aaKnown RBP6.96□□□□□ -1.3
LINC00397-202ENST00000606785 DDX46Q7L014 1031 aaKnown RBP6.96□□□□□ -1.3
LINC00397-202ENST00000606785 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 CDH24Q86UP0 819 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 FMNL3Q8IVF7 1028 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 AGGF1Q8N302 714 aaeCLIP6.96□□□□□ -1.3
LINC00397-202ENST00000606785 GSTCDQ8NEC7 633 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 ATL2Q8NHH9 583 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 RIN3Q8TB24 985 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 SYTL5Q8TDW5 730 aaPredicted RBP6.96□□□□□ -1.3
LINC00397-202ENST00000606785 KCTD13Q8WZ19 329 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 CCDC140Q96MF4 163 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 SLC52A2Q9HAB3 445 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 PRR13Q9NZ81 148 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 FBXL21Q9UKT6 434 aa6.96□□□□□ -1.3
LINC00397-202ENST00000606785 DIS3Q9Y2L1 958 aaKnown RBP6.96□□□□□ -1.3
LINC00397-202ENST00000606785 THRAP3Q9Y2W1 955 aaKnown RBP6.96□□□□□ -1.3
LINC00397-202ENST00000606785 SLITRK5O94991 958 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 KCNH1O95259 989 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 NPTXRO95502 500 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 RAB6AP20340 208 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 HOXC12P31275 282 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 PREPP48147 710 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 GFRA1P56159 465 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 MAP4K2Q12851 820 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 GRB10Q13322 594 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 FAM50AQ14320 339 aaKnown RBP6.95□□□□□ -1.3
LINC00397-202ENST00000606785 GTF2IRD2BQ6EKJ0 949 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 GTF2IRD2Q86UP8 949 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 PTPRN2Q92932 1015 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 NKX2-4Q9H2Z4 354 aa6.95□□□□□ -1.3
LINC00397-202ENST00000606785 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.94□□□□□ -1.3
LINC00397-202ENST00000606785 FAM229AH3BQW9 127 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 EYA4O95677 639 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 ASLP04424 464 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 USP11P51784 963 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 STRA8Q7Z7C7 330 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 LEO1Q8WVC0 666 aaPredicted RBP6.94□□□□□ -1.3
LINC00397-202ENST00000606785 BRF1Q92994 677 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 NACC1Q96RE7 527 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 PRDM14Q9GZV8 571 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 NOL6Q9H6R4 1146 aaKnown RBP6.94□□□□□ -1.3
LINC00397-202ENST00000606785 DAGLAQ9Y4D2 1042 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 TNPO3Q9Y5L0 923 aaKnown RBP6.94□□□□□ -1.3
LINC00397-202ENST00000606785 WASHC2CQ9Y4E1 1318 aa6.94□□□□□ -1.3
LINC00397-202ENST00000606785 BLACEA4D250 179 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 SART1O43290 800 aaKnown RBP6.93□□□□□ -1.3
LINC00397-202ENST00000606785 OPA1O60313 960 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 SCG5P05408 212 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 GUCY2FP51841 1108 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 PPP2R5DQ14738 602 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 SF1Q15637 639 aaKnown RBP6.93□□□□□ -1.3
LINC00397-202ENST00000606785 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 MAMDC2Q7Z304 686 aaPredicted RBP6.93□□□□□ -1.3
LINC00397-202ENST00000606785 FGD2Q7Z6J4 655 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms