RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 PPP2R2DQ66LE6 453 aa18.61■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 ADAMTS5Q9UNA0 930 aa18.61■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 MYADML2A6NDP7 307 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 TRIM27P14373 513 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 TFF2Q03403 129 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 EVX2Q03828 476 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 FAM126BQ8IXS8 530 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 SSH3Q8TE77 659 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 SDR42E1Q8WUS8 393 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 FRAT1Q92837 279 aaPredicted RBP18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 GOPCQ9HD26 462 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 FBXO28Q9NVF7 368 aa18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 YBX2Q9Y2T7 364 aaKnown RBP18.6■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 NAV1Q8NEY1 1877 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 BCAR3O75815 825 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 SNAI1O95863 264 aaPredicted RBP18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 AKR1B1P15121 316 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 CYP2C18P33260 490 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 TTF1Q15361 905 aaPredicted RBP18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 GNASQ5JWF2 1037 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 OTOP2Q7RTS6 562 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 SIAH1Q8IUQ4 282 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 CLUAP1Q96AJ1 413 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 DYNLL2Q96FJ2 89 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 CCDC17Q96LX7 622 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 ZNF214Q9UL59 606 aaPredicted RBP18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 PPP1R9AQ9ULJ8 1098 aa18.59■□□□□ 0.57
NEDD8-MDP1-204ENST00000605847 KCNQ1P51787 676 aa18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ATP8B2P98198 1209 aa18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ACVR2BQ13705 512 aa18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 SLC9C2Q5TAH2 1124 aa18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 MAMDC4Q6UXC1 1216 aa18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 AMOTL1Q8IY63 956 aa18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 LRFN3Q9BTN0 628 aa18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 HIPK3Q9H422 1215 aa18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ZNFX1Q9P2E3 1918 aaKnown RBP18.58■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 GTPBP6O43824 516 aaPredicted RBP18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CYP2D6P10635 497 aa18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 EEF2P13639 858 aaKnown RBP18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 GJA9P57773 515 aa18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 IRX5P78411 483 aaPredicted RBP18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 TMEM31Q5JXX7 168 aa18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 SNRNP48Q6IEG0 339 aaKnown RBP18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 TEX13BQ9BXU2 312 aa18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ABHD16BQ9H3Z7 469 aa18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CTDP1Q9Y5B0 961 aaPredicted RBP18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 SLC4A7Q9Y6M7 1214 aa18.57■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ERC2O15083 957 aa18.56■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 RABGGTBP53611 331 aa18.56■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CCDC144BQ3MJ40 725 aa18.56■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 FAM83BQ5T0W9 1011 aa18.56■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 EPHX3Q9H6B9 360 aa18.56■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 KANSL2Q9H9L4 492 aa18.56■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.56■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ZNF532Q9HCE3 1301 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ZBBXA8MT70 800 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CD4P01730 458 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 PDE6AP16499 860 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ZNF467Q7Z7K2 595 aaPredicted RBP18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 RPUSD2Q8IZ73 545 aaKnown RBP18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 LCORLQ8N3X6 602 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 REPS2Q8NFH8 660 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 UPF3AQ9H1J1 476 aaKnown RBP18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 TNNQ9UQP3 1299 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 NOP58Q9Y2X3 529 aaKnown RBP18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 PCDHA11Q9Y5I1 949 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 XIRP2A4UGR9 3374 aa18.55■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CHD9Q3L8U1 2897 aa18.54■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 COL11A1P12107 1806 aaPredicted RBP18.54■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CDK8P49336 464 aa18.54■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CCL23P55773 120 aa18.54■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 NOL8Q76FK4 1167 aaKnown RBP18.54■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 AACSQ86V21 672 aa18.54■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ANKRD35Q8N283 1001 aa18.54■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 DNAJC25-GNG10A0A024R161 153 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ADCY6O43306 1168 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 MYOGP15173 224 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 DDRGK1Q96HY6 314 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 C1orf115Q9H7X2 142 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ARMT1Q9H993 441 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ATP8A2Q9NTI2 1148 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 COG5Q9UP83 839 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 PARP14Q460N5 1801 aa18.53■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 UMODL1Q5DID0 1318 aa18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 TCF20Q9UGU0 1960 aaKnown RBP18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CABYRO75952 493 aa18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ATP2A2P16615 1042 aaKnown RBP18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 BEX3Q00994 111 aa18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ARMCX2Q7L311 632 aa18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 CPXCR1Q8N123 301 aa18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 TMEM57Q8N5G2 664 aa18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 RIPK3Q9Y572 518 aa18.52■□□□□ 0.56
NEDD8-MDP1-204ENST00000605847 ZBED4O75132 1171 aa18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 ITGA7Q13683 1181 aa18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 TMEM67Q5HYA8 995 aa18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 CXCL17Q6UXB2 119 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms