RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 PLA2G6O60733 806 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 ZBED4O75132 1171 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 STAT3P40763 770 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 ZNF543Q08ER8 600 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 FAM160B2Q86V87 743 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 NCAPG2Q86XI2 1143 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 CPXCR1Q8N123 301 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 IGDCC4Q8TDY8 1250 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 SLC38A10Q9HBR0 1119 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 CWC22Q9HCG8 908 aaKnown RBP23.53■■□□□ 1.36
SSBP4-210ENST00000601444 RAVER2Q9HCJ3 691 aaKnown RBP23.53■■□□□ 1.36
SSBP4-210ENST00000601444 PRR12Q9ULL5 1215 aa23.53■■□□□ 1.36
SSBP4-210ENST00000601444 COL11A1P12107 1806 aaPredicted RBP23.53■■□□□ 1.36
SSBP4-210ENST00000601444 PRC1O43663 620 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 REC8O95072 547 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 HSPA4P34932 840 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 SLC4A3P48751 1232 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 SLC9C1Q4G0N8 1177 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 TMEM67Q5HYA8 995 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 MORN1Q5T089 497 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 RIOX2Q8IUF8 465 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 CPVLQ9H3G5 476 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 RIPK3Q9Y572 518 aa23.52■■□□□ 1.36
SSBP4-210ENST00000601444 ELNP15502 786 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 CYP2B6P20813 491 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 PTPREP23469 700 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 IRF5Q13568 498 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 WTAPQ15007 396 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 TSGA10IPQ3SY00 556 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 BTNL9Q6UXG8 535 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 SHCBP1Q8NEM2 672 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 USP6NLQ92738 828 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 NUDT12Q9BQG2 462 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 LRRC2Q9BYS8 371 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 PLXNB2O15031 1838 aa23.51■■□□□ 1.35
SSBP4-210ENST00000601444 ERICH2A1L162 156 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 ADCY3O60266 1144 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 MYCP01106 439 aaPredicted RBP23.5■■□□□ 1.35
SSBP4-210ENST00000601444 GRK4P32298 578 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 MCM5P33992 734 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 SNRNP48Q6IEG0 339 aaKnown RBP23.5■■□□□ 1.35
SSBP4-210ENST00000601444 KCNB2Q92953 911 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 NEK1Q96PY6 1258 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 USP26Q9BXU7 913 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 UBA5Q9GZZ9 404 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 CTDP1Q9Y5B0 961 aaPredicted RBP23.5■■□□□ 1.35
SSBP4-210ENST00000601444 ZNF536O15090 1300 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 DOCK3Q8IZD9 2030 aa23.5■■□□□ 1.35
SSBP4-210ENST00000601444 ZKSCAN1P17029 563 aaPredicted RBP23.49■■□□□ 1.35
SSBP4-210ENST00000601444 SART3Q15020 963 aaKnown RBP23.49■■□□□ 1.35
SSBP4-210ENST00000601444 SYDE2Q5VT97 1194 aa23.49■■□□□ 1.35
SSBP4-210ENST00000601444 CCDC174Q6PII3 467 aa23.49■■□□□ 1.35
SSBP4-210ENST00000601444 ARMC5Q96C12 935 aa23.49■■□□□ 1.35
SSBP4-210ENST00000601444 AGBL1Q96MI9 1066 aa23.49■■□□□ 1.35
SSBP4-210ENST00000601444 TEX13BQ9BXU2 312 aa23.49■■□□□ 1.35
SSBP4-210ENST00000601444 MROH8Q9H579 483 aa23.49■■□□□ 1.35
SSBP4-210ENST00000601444 LY9Q9HBG7 655 aa23.49■■□□□ 1.35
SSBP4-210ENST00000601444 SNX14Q9Y5W7 946 aa23.49■■□□□ 1.35
SSBP4-210ENST00000601444 SLC15A5A6NIM6 579 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 ATP2A1O14983 1001 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 SLC25A27O95847 323 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 TAL1P17542 331 aaPredicted RBP23.48■■□□□ 1.35
SSBP4-210ENST00000601444 GRB14Q14449 540 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 STAG2Q8N3U4 1231 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 ZNF333Q96JL9 665 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 TCEANC2Q96MN5 208 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 IVNS1ABPQ9Y6Y0 642 aa23.48■■□□□ 1.35
SSBP4-210ENST00000601444 SH2B2O14492 632 aaPredicted RBP23.47■■□□□ 1.35
SSBP4-210ENST00000601444 CPA1P15085 419 aa23.47■■□□□ 1.35
SSBP4-210ENST00000601444 MAP2K5Q13163 448 aa23.47■■□□□ 1.35
SSBP4-210ENST00000601444 CCL14Q16627 93 aa23.47■■□□□ 1.35
SSBP4-210ENST00000601444 GPATCH4Q5T3I0 446 aaKnown RBP23.47■■□□□ 1.35
SSBP4-210ENST00000601444 PARP1P09874 1014 aaKnown RBP23.46■■□□□ 1.35
SSBP4-210ENST00000601444 FDX1P10109 184 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 ADORA2AP29274 412 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 EXOSC10Q01780 885 aaKnown RBP23.46■■□□□ 1.35
SSBP4-210ENST00000601444 TRIM32Q13049 653 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 NBPF11Q86T75 865 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 SLAIN1Q8ND83 568 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 NPLOC4Q8TAT6 608 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 PXYLP1Q8TE99 480 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 TMEM87BQ96K49 555 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 RANBP17Q9H2T7 1088 aaKnown RBP23.46■■□□□ 1.35
SSBP4-210ENST00000601444 BIN2Q9UBW5 565 aaPredicted RBP23.46■■□□□ 1.35
SSBP4-210ENST00000601444 MAD2L2Q9UI95 211 aa23.46■■□□□ 1.35
SSBP4-210ENST00000601444 STRNO43815 780 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 COBLO75128 1261 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 RGS2P41220 211 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 OAZ1P54368 228 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 TROAPQ12815 778 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 KRT32Q14532 448 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 MTFR1Q15390 333 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 ASPRV1Q53RT3 343 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 IFFO2Q5TF58 517 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 TRIB2Q92519 343 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 JAKMIP1Q96N16 626 aaKnown RBP23.45■■□□□ 1.34
SSBP4-210ENST00000601444 MYL10Q9BUA6 226 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 HOMER2Q9NSB8 354 aa23.45■■□□□ 1.34
SSBP4-210ENST00000601444 SEC24BO95487 1268 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms