RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 CPXCR1Q8N123 301 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 MAML3Q96JK9 1138 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 TEX13BQ9BXU2 312 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 DDX20Q9UHI6 824 aaKnown RBP17.85■□□□□ 0.45
LIG1-215ENST00000597901 CTDP1Q9Y5B0 961 aaPredicted RBP17.85■□□□□ 0.45
LIG1-215ENST00000597901 RLFQ13129 1914 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 MSCO60682 206 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 CYBAP13498 195 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 NOVP48745 357 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 ZNF792Q3KQV3 632 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 SNRNP48Q6IEG0 339 aaKnown RBP17.84■□□□□ 0.45
LIG1-215ENST00000597901 RCSD1Q6JBY9 416 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
LIG1-215ENST00000597901 CHURC1Q8WUH1 139 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 STAG1Q8WVM7 1258 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 CHMP4CQ96CF2 233 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 GMCL1Q96IK5 515 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 SLC38A10Q9HBR0 1119 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 RAVER2Q9HCJ3 691 aaKnown RBP17.84■□□□□ 0.45
LIG1-215ENST00000597901 TOMM22Q9NS69 142 aa17.84■□□□□ 0.45
LIG1-215ENST00000597901 DIS3Q9Y2L1 958 aaKnown RBP17.84■□□□□ 0.45
LIG1-215ENST00000597901 COL6A1P12109 1028 aa17.83■□□□□ 0.44
LIG1-215ENST00000597901 PDE4AP27815 886 aa17.83■□□□□ 0.44
LIG1-215ENST00000597901 SLC1A4P43007 532 aa17.83■□□□□ 0.44
LIG1-215ENST00000597901 HAND2P61296 217 aa17.83■□□□□ 0.44
LIG1-215ENST00000597901 RRP12Q5JTH9 1297 aaKnown RBP17.83■□□□□ 0.44
LIG1-215ENST00000597901 CHRDL2Q6WN34 429 aa17.83■□□□□ 0.44
LIG1-215ENST00000597901 DIAPH3Q9NSV4 1193 aa17.83■□□□□ 0.44
LIG1-215ENST00000597901 ZMYM6O95789 1325 aa17.82■□□□□ 0.44
LIG1-215ENST00000597901 HIP1O00291 1037 aa17.82■□□□□ 0.44
LIG1-215ENST00000597901 FDX1P10109 184 aa17.82■□□□□ 0.44
LIG1-215ENST00000597901 MFSD6Q6ZSS7 791 aa17.82■□□□□ 0.44
LIG1-215ENST00000597901 TINF2Q9BSI4 451 aa17.82■□□□□ 0.44
LIG1-215ENST00000597901 TCP11L1Q9NUJ3 509 aa17.82■□□□□ 0.44
LIG1-215ENST00000597901 ISY1Q9ULR0 285 aaKnown RBP17.82■□□□□ 0.44
LIG1-215ENST00000597901 GREB1LQ9C091 1923 aaPredicted RBP17.82■□□□□ 0.44
LIG1-215ENST00000597901 MYH8P13535 1937 aa17.81■□□□□ 0.44
LIG1-215ENST00000597901 SEPT4O43236 478 aa17.81■□□□□ 0.44
LIG1-215ENST00000597901 PLA2G6O60733 806 aa17.81■□□□□ 0.44
LIG1-215ENST00000597901 OAZ1P54368 228 aa17.81■□□□□ 0.44
LIG1-215ENST00000597901 AKNAD1Q5T1N1 836 aa17.81■□□□□ 0.44
LIG1-215ENST00000597901 KCTD1Q719H9 257 aa17.81■□□□□ 0.44
LIG1-215ENST00000597901 FAM160B2Q86V87 743 aa17.81■□□□□ 0.44
LIG1-215ENST00000597901 DDX11Q96FC9 970 aa17.81■□□□□ 0.44
LIG1-215ENST00000597901 PFASO15067 1338 aa17.8■□□□□ 0.44
LIG1-215ENST00000597901 ZNF213O14771 459 aa17.8■□□□□ 0.44
LIG1-215ENST00000597901 PCP11498 1178 aaKnown RBP17.8■□□□□ 0.44
LIG1-215ENST00000597901 STAT2P52630 851 aa17.8■□□□□ 0.44
LIG1-215ENST00000597901 ANO1Q5XXA6 986 aa17.8■□□□□ 0.44
LIG1-215ENST00000597901 CHST13Q8NET6 341 aa17.8■□□□□ 0.44
LIG1-215ENST00000597901 TMEM47Q9BQJ4 181 aa17.8■□□□□ 0.44
LIG1-215ENST00000597901 NRBP1Q9UHY1 535 aa17.8■□□□□ 0.44
LIG1-215ENST00000597901 MTMR7Q9Y216 660 aa17.8■□□□□ 0.44
LIG1-215ENST00000597901 A0A0G2JMZ2 1700 aa17.79■□□□□ 0.44
LIG1-215ENST00000597901 DNAJC25-GNG10A0A024R161 153 aa17.79■□□□□ 0.44
LIG1-215ENST00000597901 TOP1P11387 765 aaKnown RBP17.79■□□□□ 0.44
LIG1-215ENST00000597901 FXR1P51114 621 aaKnown RBP eCLIP17.79■□□□□ 0.44
LIG1-215ENST00000597901 IKQ13123 557 aaPredicted RBP17.79■□□□□ 0.44
LIG1-215ENST00000597901 C7orf61Q8IZ16 206 aa17.79■□□□□ 0.44
LIG1-215ENST00000597901 ARRDC4Q8NCT1 418 aa17.79■□□□□ 0.44
LIG1-215ENST00000597901 TTC14Q96N46 770 aa17.79■□□□□ 0.44
LIG1-215ENST00000597901 SENP6Q9GZR1 1112 aaPredicted RBP17.79■□□□□ 0.44
LIG1-215ENST00000597901 RNF41Q9H4P4 317 aaPredicted RBP17.79■□□□□ 0.44
LIG1-215ENST00000597901 FBXO40Q9UH90 709 aa17.79■□□□□ 0.44
LIG1-215ENST00000597901 TAL1P17542 331 aaPredicted RBP17.78■□□□□ 0.44
LIG1-215ENST00000597901 GJC2Q5T442 439 aaPredicted RBP17.78■□□□□ 0.44
LIG1-215ENST00000597901 TTC22Q5TAA0 569 aa17.78■□□□□ 0.44
LIG1-215ENST00000597901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.78■□□□□ 0.44
LIG1-215ENST00000597901 TBC1D10CQ8IV04 446 aa17.78■□□□□ 0.44
LIG1-215ENST00000597901 ANKRD35Q8N283 1001 aa17.78■□□□□ 0.44
LIG1-215ENST00000597901 DCAF4Q8WV16 495 aa17.78■□□□□ 0.44
LIG1-215ENST00000597901 AGBL1Q96MI9 1066 aa17.78■□□□□ 0.44
LIG1-215ENST00000597901 RBM27Q9P2N5 1060 aaKnown RBP17.78■□□□□ 0.44
LIG1-215ENST00000597901 PRR12Q9ULL5 1215 aa17.78■□□□□ 0.44
LIG1-215ENST00000597901 ZNF536O15090 1300 aa17.77■□□□□ 0.44
LIG1-215ENST00000597901 DNM1LO00429 736 aa17.77■□□□□ 0.44
LIG1-215ENST00000597901 ZNF865P0CJ78 1059 aaPredicted RBP17.77■□□□□ 0.44
LIG1-215ENST00000597901 GSPT1P15170 499 aaKnown RBP17.77■□□□□ 0.44
LIG1-215ENST00000597901 SNAP25P60880 206 aa17.77■□□□□ 0.44
LIG1-215ENST00000597901 LRRC26Q2I0M4 334 aa17.77■□□□□ 0.44
LIG1-215ENST00000597901 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.44
LIG1-215ENST00000597901 RASGRP2Q7LDG7 609 aa17.77■□□□□ 0.44
LIG1-215ENST00000597901 MSL3Q8N5Y2 521 aaKnown RBP17.77■□□□□ 0.44
LIG1-215ENST00000597901 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
LIG1-215ENST00000597901 PRO3102Q9H379 93 aa17.77■□□□□ 0.44
LIG1-215ENST00000597901 SNAI1O95863 264 aaPredicted RBP17.76■□□□□ 0.43
LIG1-215ENST00000597901 MAMDC4Q6UXC1 1216 aa17.76■□□□□ 0.43
LIG1-215ENST00000597901 ESR2Q92731 530 aa17.76■□□□□ 0.43
LIG1-215ENST00000597901 HOMER2Q9NSB8 354 aa17.76■□□□□ 0.43
LIG1-215ENST00000597901 CTNNA3Q9UI47 895 aa17.76■□□□□ 0.43
LIG1-215ENST00000597901 ZMYND8Q9ULU4 1186 aaPredicted RBP17.76■□□□□ 0.43
LIG1-215ENST00000597901 SLC16A2P36021 539 aa17.75■□□□□ 0.43
LIG1-215ENST00000597901 CCDC96Q2M329 555 aa17.75■□□□□ 0.43
LIG1-215ENST00000597901 TKFCQ3LXA3 575 aa17.75■□□□□ 0.43
LIG1-215ENST00000597901 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
LIG1-215ENST00000597901 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
LIG1-215ENST00000597901 ZNF467Q7Z7K2 595 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms