RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SNX14Q9Y5W7 946 aa23.02■■□□□ 1.28
SHKBP1-214ENST00000597396 ZNFX1Q9P2E3 1918 aaKnown RBP23.02■■□□□ 1.28
SHKBP1-214ENST00000597396 PLA2G6O60733 806 aa23.01■■□□□ 1.27
SHKBP1-214ENST00000597396 ZBED4O75132 1171 aa23.01■■□□□ 1.27
SHKBP1-214ENST00000597396 MAPK4P31152 587 aa23.01■■□□□ 1.27
SHKBP1-214ENST00000597396 ZNF543Q08ER8 600 aa23.01■■□□□ 1.27
SHKBP1-214ENST00000597396 ADCK5Q3MIX3 580 aa23.01■■□□□ 1.27
SHKBP1-214ENST00000597396 PORCNQ9H237 461 aa23.01■■□□□ 1.27
SHKBP1-214ENST00000597396 SNHG28P0DPA3 235 aa23■■□□□ 1.27
SHKBP1-214ENST00000597396 FDX1P10109 184 aa23■■□□□ 1.27
SHKBP1-214ENST00000597396 PRMT2P55345 433 aa23■■□□□ 1.27
SHKBP1-214ENST00000597396 TMEM132BQ14DG7 1078 aa23■■□□□ 1.27
SHKBP1-214ENST00000597396 GPATCH4Q5T3I0 446 aaKnown RBP23■■□□□ 1.27
SHKBP1-214ENST00000597396 TTBK2Q6IQ55 1244 aa23■■□□□ 1.27
SHKBP1-214ENST00000597396 IGDCC4Q8TDY8 1250 aa23■■□□□ 1.27
SHKBP1-214ENST00000597396 JAKMIP1Q96N16 626 aaKnown RBP23■■□□□ 1.27
SHKBP1-214ENST00000597396 SRRDQ9UH36 339 aa23■■□□□ 1.27
SHKBP1-214ENST00000597396 PTPN22Q9Y2R2 807 aa23■■□□□ 1.27
SHKBP1-214ENST00000597396 HMGB1P09429 215 aaKnown RBP22.99■■□□□ 1.27
SHKBP1-214ENST00000597396 NFXL1Q6ZNB6 911 aa22.99■■□□□ 1.27
SHKBP1-214ENST00000597396 MOV10L1Q9BXT6 1211 aaKnown RBP22.99■■□□□ 1.27
SHKBP1-214ENST00000597396 LRRC2Q9BYS8 371 aa22.99■■□□□ 1.27
SHKBP1-214ENST00000597396 SENP2Q9HC62 589 aa22.99■■□□□ 1.27
SHKBP1-214ENST00000597396 SH2B2O14492 632 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 PARP1P09874 1014 aaKnown RBP22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 GOLGA8HP0CJ92 632 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 SLC16A2P36021 539 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 STAT3P40763 770 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 COL9A3Q14050 684 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 ASPRV1Q53RT3 343 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 SYDE2Q5VT97 1194 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 DHX32Q7L7V1 743 aaKnown RBP22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 PLEKHH3Q7Z736 793 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 CATIPQ7Z7H3 387 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 NCAPG2Q86XI2 1143 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 CPXCR1Q8N123 301 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 TMTC2Q8N394 836 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 REPS2Q8NFH8 660 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 LY9Q9HBG7 655 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 SLC38A10Q9HBR0 1119 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 PRR12Q9ULL5 1215 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 IVNS1ABPQ9Y6Y0 642 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 WDR19Q8NEZ3 1342 aa22.98■■□□□ 1.27
SHKBP1-214ENST00000597396 CCDC69A6NI79 296 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 PSMA5P28066 241 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 PRKCZQ05513 592 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 BLOC1S2Q6QNY1 142 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 BTNL9Q6UXG8 535 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 GPR142Q7Z601 462 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 SHCBP1Q8NEM2 672 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 RAET1EQ8TD07 263 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 GPHNQ9NQX3 736 aaPredicted RBP22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 ZNF214Q9UL59 606 aaPredicted RBP22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 GABRQQ9UN88 632 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 PTCH2Q9Y6C5 1203 aa22.97■■□□□ 1.27
SHKBP1-214ENST00000597396 SMCHD1A6NHR9 2005 aa22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 SLC25A27O95847 323 aa22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 ERCC3P19447 782 aa22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 COPB2P35606 906 aa22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 SLC4A3P48751 1232 aa22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 SNRNP48Q6IEG0 339 aaKnown RBP22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 RIOX2Q8IUF8 465 aa22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 TCEANC2Q96MN5 208 aa22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 TEX13BQ9BXU2 312 aa22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 RAVER2Q9HCJ3 691 aaKnown RBP22.96■■□□□ 1.27
SHKBP1-214ENST00000597396 LIFRP42702 1097 aa22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 FLT3LGP49771 235 aa22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 FGD1P98174 961 aa22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 EXOSC10Q01780 885 aaKnown RBP22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 C8orf34Q49A92 452 aa22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 ZNF654Q8IZM8 581 aa22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 NUP133Q8WUM0 1156 aa22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 NUDT12Q9BQG2 462 aa22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 MROH8Q9H579 483 aa22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 BAZ2BQ9UIF8 2168 aaKnown RBP22.95■■□□□ 1.26
SHKBP1-214ENST00000597396 PDE4DIPQ5VU43 2346 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 CASTP20810 708 aaKnown RBP22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 OAZ1P54368 228 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 SNAP25P60880 206 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 GRM4Q14833 912 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 CCDC174Q6PII3 467 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 SOCS4Q8WXH5 440 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 UBA5Q9GZZ9 404 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 PLXNA1Q9UIW2 1896 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 ZNF236Q9UL36 1845 aa22.94■■□□□ 1.26
SHKBP1-214ENST00000597396 ATP2A1O14983 1001 aa22.93■■□□□ 1.26
SHKBP1-214ENST00000597396 DHX16O60231 1041 aaKnown RBP22.93■■□□□ 1.26
SHKBP1-214ENST00000597396 DDAH1O94760 285 aa22.93■■□□□ 1.26
SHKBP1-214ENST00000597396 SEC24BO95487 1268 aa22.93■■□□□ 1.26
SHKBP1-214ENST00000597396 CPA1P15085 419 aa22.93■■□□□ 1.26
SHKBP1-214ENST00000597396 RANBP17Q9H2T7 1088 aaKnown RBP22.93■■□□□ 1.26
SHKBP1-214ENST00000597396 CPVLQ9H3G5 476 aa22.93■■□□□ 1.26
SHKBP1-214ENST00000597396 SLC15A5A6NIM6 579 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 RPS6KB1P23443 525 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 PTPREP23469 700 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 TROAPQ12815 778 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 SYNE3Q6ZMZ3 975 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 STAG2Q8N3U4 1231 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 MYL10Q9BUA6 226 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 MAD2L2Q9UI95 211 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms