RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 NOVP48745 357 aa21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 MFAP1P55081 439 aaKnown RBP21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 KCTD2Q14681 263 aa21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 ZNF589Q86UQ0 364 aaPredicted RBP21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 TRPV1Q8NER1 839 aa21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 GMCL1Q96IK5 515 aa21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 TACC3Q9Y6A5 838 aa21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 CCDC171Q6TFL3 1326 aa21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 FRMPD3Q5JV73 1810 aa21.25■□□□□ 0.99
CHMP2A-203ENST00000597209 ALPK3Q96L96 1907 aa21.24■□□□□ 0.99
CHMP2A-203ENST00000597209 OAZ1P54368 228 aa21.24■□□□□ 0.99
CHMP2A-203ENST00000597209 ZNF792Q3KQV3 632 aa21.24■□□□□ 0.99
CHMP2A-203ENST00000597209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.24■□□□□ 0.99
CHMP2A-203ENST00000597209 SLC38A10Q9HBR0 1119 aa21.24■□□□□ 0.99
CHMP2A-203ENST00000597209 INCENPQ9NQS7 918 aa21.24■□□□□ 0.99
CHMP2A-203ENST00000597209 IL17RBQ9NRM6 502 aa21.24■□□□□ 0.99
CHMP2A-203ENST00000597209 NRBP1Q9UHY1 535 aa21.24■□□□□ 0.99
CHMP2A-203ENST00000597209 PLA2G6O60733 806 aa21.23■□□□□ 0.99
CHMP2A-203ENST00000597209 CNGA1P29973 690 aa21.23■□□□□ 0.99
CHMP2A-203ENST00000597209 SNRNP48Q6IEG0 339 aaKnown RBP21.23■□□□□ 0.99
CHMP2A-203ENST00000597209 KIFC2Q96AC6 838 aa21.23■□□□□ 0.99
CHMP2A-203ENST00000597209 PFASO15067 1338 aa21.23■□□□□ 0.99
CHMP2A-203ENST00000597209 HIP1O00291 1037 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 SEPT4O43236 478 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 RANBP6O60518 1105 aaKnown RBP21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 PCP11498 1178 aaKnown RBP21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 CHRDL2Q6WN34 429 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 FAM160B2Q86V87 743 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 CHURC1Q8WUH1 139 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 PRO3102Q9H379 93 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 TCP11L1Q9NUJ3 509 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 STX8Q9UNK0 236 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 CTDP1Q9Y5B0 961 aaPredicted RBP21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 CEP290O15078 2479 aa21.22■□□□□ 0.99
CHMP2A-203ENST00000597209 TMEM232C9JQI7 657 aa21.21■□□□□ 0.99
CHMP2A-203ENST00000597209 SLC1A4P43007 532 aa21.21■□□□□ 0.99
CHMP2A-203ENST00000597209 STAG1Q8WVM7 1258 aa21.21■□□□□ 0.99
CHMP2A-203ENST00000597209 TINF2Q9BSI4 451 aa21.21■□□□□ 0.99
CHMP2A-203ENST00000597209 RIPK3Q9Y572 518 aa21.21■□□□□ 0.99
CHMP2A-203ENST00000597209 PGK2P07205 417 aa21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 STAT2P52630 851 aa21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 RCSD1Q6JBY9 416 aa21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 CPXCR1Q8N123 301 aa21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 MSL3Q8N5Y2 521 aaKnown RBP21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 CHST13Q8NET6 341 aa21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 RAVER2Q9HCJ3 691 aaKnown RBP21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 FBXO40Q9UH90 709 aa21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 PLXNA1Q9UIW2 1896 aa21.2■□□□□ 0.98
CHMP2A-203ENST00000597209 DNAJC25-GNG10A0A024R161 153 aa21.19■□□□□ 0.98
CHMP2A-203ENST00000597209 DNM1LO00429 736 aa21.19■□□□□ 0.98
CHMP2A-203ENST00000597209 NMT2O60551 498 aa21.19■□□□□ 0.98
CHMP2A-203ENST00000597209 MCCP23508 829 aa21.19■□□□□ 0.98
CHMP2A-203ENST00000597209 NT5C2P49902 561 aa21.19■□□□□ 0.98
CHMP2A-203ENST00000597209 ARRDC4Q8NCT1 418 aa21.19■□□□□ 0.98
CHMP2A-203ENST00000597209 DIAPH3Q9NSV4 1193 aa21.19■□□□□ 0.98
CHMP2A-203ENST00000597209 PRAMEF19Q5SWL8 479 aa21.18■□□□□ 0.98
CHMP2A-203ENST00000597209 AKNAD1Q5T1N1 836 aa21.18■□□□□ 0.98
CHMP2A-203ENST00000597209 C7orf61Q8IZ16 206 aa21.18■□□□□ 0.98
CHMP2A-203ENST00000597209 DDX11Q96FC9 970 aa21.18■□□□□ 0.98
CHMP2A-203ENST00000597209 RNF41Q9H4P4 317 aaPredicted RBP21.18■□□□□ 0.98
CHMP2A-203ENST00000597209 TOMM22Q9NS69 142 aa21.18■□□□□ 0.98
CHMP2A-203ENST00000597209 RBM27Q9P2N5 1060 aaKnown RBP21.18■□□□□ 0.98
CHMP2A-203ENST00000597209 FXR1P51114 621 aaKnown RBP eCLIP21.17■□□□□ 0.98
CHMP2A-203ENST00000597209 CWC27Q6UX04 472 aaKnown RBP21.17■□□□□ 0.98
CHMP2A-203ENST00000597209 MAMDC4Q6UXC1 1216 aa21.17■□□□□ 0.98
CHMP2A-203ENST00000597209 MFSD6Q6ZSS7 791 aa21.17■□□□□ 0.98
CHMP2A-203ENST00000597209 ZNF467Q7Z7K2 595 aaPredicted RBP21.17■□□□□ 0.98
CHMP2A-203ENST00000597209 DCAF4Q8WV16 495 aa21.17■□□□□ 0.98
CHMP2A-203ENST00000597209 TTC14Q96N46 770 aa21.17■□□□□ 0.98
CHMP2A-203ENST00000597209 SYNGAP1Q96PV0 1343 aa21.16■□□□□ 0.98
CHMP2A-203ENST00000597209 A0A1W2PPC1 479 aa21.16■□□□□ 0.98
CHMP2A-203ENST00000597209 TOP1P11387 765 aaKnown RBP21.16■□□□□ 0.98
CHMP2A-203ENST00000597209 HAND2P61296 217 aa21.16■□□□□ 0.98
CHMP2A-203ENST00000597209 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
CHMP2A-203ENST00000597209 RRP12Q5JTH9 1297 aaKnown RBP21.16■□□□□ 0.98
CHMP2A-203ENST00000597209 KCTD1Q719H9 257 aa21.16■□□□□ 0.98
CHMP2A-203ENST00000597209 ZNF536O15090 1300 aa21.15■□□□□ 0.98
CHMP2A-203ENST00000597209 PDE4AP27815 886 aa21.15■□□□□ 0.98
CHMP2A-203ENST00000597209 IKQ13123 557 aaPredicted RBP21.15■□□□□ 0.98
CHMP2A-203ENST00000597209 LRRC26Q2I0M4 334 aa21.15■□□□□ 0.98
CHMP2A-203ENST00000597209 TMEM47Q9BQJ4 181 aa21.15■□□□□ 0.98
CHMP2A-203ENST00000597209 DSCC1Q9BVC3 393 aa21.15■□□□□ 0.98
CHMP2A-203ENST00000597209 SENP6Q9GZR1 1112 aaPredicted RBP21.15■□□□□ 0.98
CHMP2A-203ENST00000597209 ISY1Q9ULR0 285 aaKnown RBP21.15■□□□□ 0.98
CHMP2A-203ENST00000597209 ZNF213O14771 459 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 ZNF865P0CJ78 1059 aaPredicted RBP21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 BMP8BP34820 402 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 SLC4A3P48751 1232 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 BTNL9Q6UXG8 535 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 TBC1D10CQ8IV04 446 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 ANKRD35Q8N283 1001 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 GDF15Q99988 308 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 PRR12Q9ULL5 1215 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 CNPY2Q9Y2B0 182 aa21.14■□□□□ 0.97
CHMP2A-203ENST00000597209 KBTBD13C9JR72 458 aa21.13■□□□□ 0.97
CHMP2A-203ENST00000597209 GJC2Q5T442 439 aaPredicted RBP21.13■□□□□ 0.97
CHMP2A-203ENST00000597209 TTC22Q5TAA0 569 aa21.13■□□□□ 0.97
CHMP2A-203ENST00000597209 ANO1Q5XXA6 986 aa21.13■□□□□ 0.97
CHMP2A-203ENST00000597209 ESR2Q92731 530 aa21.13■□□□□ 0.97
CHMP2A-203ENST00000597209 ACAD9Q9H845 621 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms