RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
PRKCSH-219ENST00000593101 HOXC10Q9NYD6 342 aa18.04■□□□□ 0.48
PRKCSH-219ENST00000593101 TESPA1A2RU30 521 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 BTBD19C9JJ37 291 aa18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 HSP90AA1P07900 732 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 KIF23Q02241 960 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 SSRP1Q08945 709 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 SREBF2Q12772 1141 aa18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 NOGQ13253 232 aa18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 SYDE2Q5VT97 1194 aa18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 BTNL9Q6UXG8 535 aa18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 ANKRD23Q86SG2 305 aa18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 PRPF38AQ8NAV1 312 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 SLF1Q9BQI6 1058 aa18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 FBXO28Q9NVF7 368 aa18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-219ENST00000593101 PTPRFP10586 1907 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 HSPA6P17066 643 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 IFNAR1P17181 557 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 IRX3P78415 501 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 AKAP17AQ02040 695 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 CUL4AQ13619 759 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 NTRK3Q16288 839 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 OTUD7BQ6GQQ9 843 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 NBPF11Q86T75 865 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 TRIM22Q8IYM9 498 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 ADGRF4Q8IZF3 695 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 PRR12Q9ULL5 1215 aa18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 CTDP1Q9Y5B0 961 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 V9GY48 417 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-219ENST00000593101 WDR33Q9C0J8 1336 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 PDHXO00330 501 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 AOC2O75106 756 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 PPFIA3O75145 1194 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 DSG3P32926 999 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 ST3GAL1Q11201 340 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 REM2Q8IYK8 340 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 PHKBQ93100 1093 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 PTPN18Q99952 460 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 SPZ1Q9BXG8 430 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 SLC26A6Q9BXS9 759 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 RIOX1Q9H6W3 641 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 JMJD4Q9H9V9 463 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 PNMA3Q9UL41 463 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 SLC45A1Q9Y2W3 748 aa18.01■□□□□ 0.47
PRKCSH-219ENST00000593101 PRPF3O43395 683 aaKnown RBP18■□□□□ 0.47
PRKCSH-219ENST00000593101 CYTH3O43739 400 aa18■□□□□ 0.47
PRKCSH-219ENST00000593101 ZBED4O75132 1171 aa18■□□□□ 0.47
PRKCSH-219ENST00000593101 CTDNEP1O95476 244 aa18■□□□□ 0.47
PRKCSH-219ENST00000593101 TM4SF4P48230 202 aa18■□□□□ 0.47
PRKCSH-219ENST00000593101 FUT2Q10981 343 aa18■□□□□ 0.47
PRKCSH-219ENST00000593101 NSUN7Q8NE18 718 aaKnown RBP18■□□□□ 0.47
PRKCSH-219ENST00000593101 ZIC5Q96T25 663 aa18■□□□□ 0.47
PRKCSH-219ENST00000593101 P2RX7Q99572 595 aaKnown RBP18■□□□□ 0.47
PRKCSH-219ENST00000593101 ASCC2Q9H1I8 757 aaPredicted RBP18■□□□□ 0.47
PRKCSH-219ENST00000593101 FOXD4L1Q9NU39 408 aa18■□□□□ 0.47
PRKCSH-219ENST00000593101 PPP1R9AQ9ULJ8 1098 aa18■□□□□ 0.47
PRKCSH-219ENST00000593101 LOC285556D6RIA3 1793 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 PTPDC1A2A3K4 754 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 DTNBO60941 627 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 FMNL1O95466 1100 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 FDX1P10109 184 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 VEGFBP49765 207 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 SNAP25P60880 206 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 HOMER1Q86YM7 354 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 IFNL1Q8IU54 200 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 DDX11Q96FC9 970 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 INTS4Q96HW7 963 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 PIGSQ96S52 555 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 SMC3Q9UQE7 1217 aa17.99■□□□□ 0.47
PRKCSH-219ENST00000593101 hCG_1642624A0A1W2PR95 340 aa17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 JAK2O60674 1132 aa17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 MAP2K2P36507 400 aa17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 SLC35G1Q2M3R5 365 aa17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 SMARCC2Q8TAQ2 1214 aa17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 ATG4CQ96DT6 458 aa17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 ORC3Q9UBD5 711 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 MYPNQ86TC9 1320 aa17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 CNTNAP5Q8WYK1 1306 aa17.98■□□□□ 0.47
PRKCSH-219ENST00000593101 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 SPDYE16A6NNV3 312 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 IGF2BP3O00425 579 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 VWA5AO00534 786 aa17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 ZBTB5O15062 677 aa17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 HERVK_113P62684 666 aa17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 HMGN5P82970 282 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 CDC37Q16543 378 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 CCDC174Q6PII3 467 aa17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 FAM184AQ8NB25 1140 aa17.97■□□□□ 0.47
PRKCSH-219ENST00000593101 WASF1Q92558 559 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms