RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 RPS6KB1P23443 525 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 LIFRP42702 1097 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 SLC4A3P48751 1232 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 ANAPC15P60006 121 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 SYNE3Q6ZMZ3 975 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 Q6ZUG5 572 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 RUFY3Q7L099 469 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
MBD1-225ENST00000591535 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
MBD1-225ENST00000591535 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
MBD1-225ENST00000591535 COL11A1P12107 1806 aaPredicted RBP16.46■□□□□ 0.23
MBD1-225ENST00000591535 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
MBD1-225ENST00000591535 PLA2G6O60733 806 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 FCGRTP55899 365 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 ASPRV1Q53RT3 343 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 ZNF654Q8IZM8 581 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
MBD1-225ENST00000591535 TM6SF1Q9BZW5 370 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 EFCC1Q9HA90 598 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 ZSWIM6Q9HCJ5 1215 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 PRR12Q9ULL5 1215 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 ADAMTS5Q9UNA0 930 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 TRIM17Q9Y577 477 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 TNPO2O14787 897 aaKnown RBP16.45■□□□□ 0.22
MBD1-225ENST00000591535 TMEM132BQ14DG7 1078 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 SYDE2Q5VT97 1194 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 CPXCR1Q8N123 301 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 UBA5Q9GZZ9 404 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 SPATC1LQ9H0A9 340 aa16.45■□□□□ 0.22
MBD1-225ENST00000591535 MGAMO43451 1857 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 FDX1P10109 184 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 SNAP25P60880 206 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 TROAPQ12815 778 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 CCDC174Q6PII3 467 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 CTU1Q7Z7A3 348 aaKnown RBP16.44■□□□□ 0.22
MBD1-225ENST00000591535 CTCFLQ8NI51 663 aaPredicted RBP16.44■□□□□ 0.22
MBD1-225ENST00000591535 TRIM47Q96LD4 638 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 C22orf23Q9BZE7 217 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 CPVLQ9H3G5 476 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 SLC38A10Q9HBR0 1119 aa16.44■□□□□ 0.22
MBD1-225ENST00000591535 ZSWIM8A7E2V4 1837 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 DDAH1O94760 285 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 CALM1P0DP23 149 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 CALM2P0DP24 149 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 CALM3P0DP25 149 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 RXRAP19793 462 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 CTGFP29279 349 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 MAPK4P31152 587 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 STAT3P40763 770 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 GRM4Q14833 912 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 BTNL9Q6UXG8 535 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 SGMS1Q86VZ5 419 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 NCAPG2Q86XI2 1143 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 CCDC144CPQ8IYA2 1237 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 STAG2Q8N3U4 1231 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 BRF1Q92994 677 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 COA7Q96BR5 231 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
MBD1-225ENST00000591535 PORCNQ9H237 461 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
MBD1-225ENST00000591535 VAT1LQ9HCJ6 419 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 A0A0G2JMZ2 1700 aa16.43■□□□□ 0.22
MBD1-225ENST00000591535 KLF18A0A0U1RQI7 1052 aa16.42■□□□□ 0.22
MBD1-225ENST00000591535 HOXD10P28358 340 aa16.42■□□□□ 0.22
MBD1-225ENST00000591535 KIF5BP33176 963 aa16.42■□□□□ 0.22
MBD1-225ENST00000591535 CAP1Q01518 475 aa16.42■□□□□ 0.22
MBD1-225ENST00000591535 SNRNP48Q6IEG0 339 aaKnown RBP16.42■□□□□ 0.22
MBD1-225ENST00000591535 OTOP1Q7RTM1 612 aa16.42■□□□□ 0.22
MBD1-225ENST00000591535 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
MBD1-225ENST00000591535 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
MBD1-225ENST00000591535 PALM3A6NDB9 673 aaPredicted RBP16.41■□□□□ 0.22
MBD1-225ENST00000591535 ZBTB43O43298 467 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 GNRH1P01148 92 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 ERCC3P19447 782 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 APOBRQ0VD83 1088 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 REPS2Q8NFH8 660 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 TEX13BQ9BXU2 312 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 ZNF214Q9UL59 606 aaPredicted RBP16.41■□□□□ 0.22
MBD1-225ENST00000591535 BRPF3Q9ULD4 1205 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 IVNS1ABPQ9Y6Y0 642 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 SLC25A27O95847 323 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 COL13A1Q5TAT6 717 aaPredicted RBP16.41■□□□□ 0.22
MBD1-225ENST00000591535 APOA5Q6Q788 366 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 PLEKHH3Q7Z736 793 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 RIOX2Q8IUF8 465 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 ADGRF4Q8IZF3 695 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 FANCBQ8NB91 859 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 BACH2Q9BYV9 841 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 MROH8Q9H579 483 aa16.41■□□□□ 0.22
MBD1-225ENST00000591535 OAZ1P54368 228 aa16.4■□□□□ 0.22
MBD1-225ENST00000591535 GPR142Q7Z601 462 aa16.4■□□□□ 0.22
MBD1-225ENST00000591535 AGBL1Q96MI9 1066 aa16.4■□□□□ 0.22
MBD1-225ENST00000591535 RANBP17Q9H2T7 1088 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms