RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 MYL3P08590 195 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 SFNP31947 248 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 TRAPPC10P48553 1259 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 RNASELQ05823 741 aaKnown RBP7.05□□□□□ -1.28
SMAD4-212ENST00000591126 BIRC2Q13490 618 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 TTC39CQ8N584 583 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 TEX13BQ9BXU2 312 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 NUP62CLQ9H1M0 184 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 LARSQ9P2J5 1176 aaKnown RBP7.05□□□□□ -1.28
SMAD4-212ENST00000591126 NDC80O14777 642 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 MAFGO15525 162 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 EFCAB14O75071 495 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 PARNO95453 639 aaKnown RBP7.05□□□□□ -1.28
SMAD4-212ENST00000591126 MTX1Q13505 466 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 UTP14CQ5TAP6 766 aaKnown RBP7.05□□□□□ -1.28
SMAD4-212ENST00000591126 CREB3L3Q68CJ9 461 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 CNNM4Q6P4Q7 775 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 Q6ZUG5 572 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 DPF3Q92784 378 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 TM6SF1Q9BZW5 370 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 ELP3Q9H9T3 547 aa7.05□□□□□ -1.28
SMAD4-212ENST00000591126 MROH7Q68CQ1 1323 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 USO1O60763 962 aaKnown RBP7.04□□□□□ -1.28
SMAD4-212ENST00000591126 NTSR2O95665 410 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 EPB41P11171 864 aaKnown RBP7.04□□□□□ -1.28
SMAD4-212ENST00000591126 ARID5AQ03989 594 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 GOLGA8FQ08AF8 430 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 GOLGA8DPQ0D2H9 430 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 SLC9C1Q4G0N8 1177 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 PLA2G4DQ86XP0 818 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 SMC5Q8IY18 1101 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 TRIM5Q9C035 493 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 CCDC113Q9H0I3 377 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 PITPNM2Q9BZ72 1349 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 ZBBXA8MT70 800 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 KLRF2D3W0D1 207 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 M0R2C6 588 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 SLC26A4O43511 780 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 MTIF2P46199 727 aaKnown RBP7.04□□□□□ -1.28
SMAD4-212ENST00000591126 PPATQ06203 517 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 CUL4BQ13620 913 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 TCERG1LQ5VWI1 586 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 PLEKHH3Q7Z736 793 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 KCTD17Q8N5Z5 321 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 UPF3BQ9BZI7 483 aaKnown RBP7.04□□□□□ -1.28
SMAD4-212ENST00000591126 C2orf40Q9H1Z8 148 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 TDRD3Q9H7E2 651 aaKnown RBP7.04□□□□□ -1.28
SMAD4-212ENST00000591126 IFT122Q9HBG6 1241 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 RIPOR2Q9Y4F9 1068 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 ZNF142P52746 1687 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-212ENST00000591126 RRN3P2A6NIE6 340 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 CCDC169A6NNP5 214 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 ADD2P35612 726 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 ITPK1Q13572 414 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 SKIV2LQ15477 1246 aaKnown RBP7.04□□□□□ -1.28
SMAD4-212ENST00000591126 HLFQ16534 295 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 CCDC26Q8TAB7 109 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 DEFB129Q9H1M3 183 aa7.04□□□□□ -1.28
SMAD4-212ENST00000591126 PRPF6O94906 941 aaKnown RBP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 PHKA1P46020 1223 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 POLGP54098 1239 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 KRT76Q01546 638 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 NOLC1Q14978 699 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 CALCRLQ16602 461 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 VWA3BQ502W6 1294 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 CAMKK2Q96RR4 588 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 SH3GLB2Q9NR46 395 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 STK39Q9UEW8 545 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 POLRMTO00411 1230 aaKnown RBP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 VIMP08670 466 aaKnown RBP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 KCNQ4P56696 695 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 METTL13Q8N6R0 699 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 PDILTQ8N807 584 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 TOPORSQ9NS56 1045 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 NYAP2Q9P242 653 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 POLR1AO95602 1720 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 FSD2A1L4K1 749 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 SMCO2A6NFE2 343 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 GNA14O95837 355 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 ASIC1P78348 528 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 CCT2P78371 535 aaKnown RBP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 USH1GQ495M9 461 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 RUFY3Q7L099 469 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 MICAL1Q8TDZ2 1067 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 PNMA6FA0A0J9YX94 578 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 FIBPO43427 364 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 TRAPPC3O43617 180 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 YEATS4O95619 227 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 GH1P01241 217 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 SPP2Q13103 211 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 LMBR1Q8WVP7 490 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 ZNF274Q96GC6 653 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-212ENST00000591126 RUFY1Q96T51 708 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 CUEDC2Q9H467 287 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 PAXBP1Q9Y5B6 917 aa7.03□□□□□ -1.28
SMAD4-212ENST00000591126 B4E1Z4 1266 aa7.02□□□□□ -1.28
SMAD4-212ENST00000591126 MAGEB2O15479 319 aa7.02□□□□□ -1.28
SMAD4-212ENST00000591126 GAP43P17677 238 aa7.02□□□□□ -1.28
SMAD4-212ENST00000591126 SSR1P43307 286 aaKnown RBP7.02□□□□□ -1.28
SMAD4-212ENST00000591126 DMP1Q13316 513 aaPredicted RBP7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms