RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
SMAD4-205ENST00000588745 PCDHA4Q9UN74 947 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 SCN4AP35499 1836 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 BMP3P12645 472 aa13.1□□□□□ -0.31
SMAD4-205ENST00000588745 SLC16A2P36021 539 aa13.1□□□□□ -0.31
SMAD4-205ENST00000588745 GSE1Q14687 1217 aa13.1□□□□□ -0.31
SMAD4-205ENST00000588745 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
SMAD4-205ENST00000588745 PPP1R18Q6NYC8 613 aa13.1□□□□□ -0.31
SMAD4-205ENST00000588745 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
SMAD4-205ENST00000588745 SYAP1Q96A49 352 aaPredicted RBP13.1□□□□□ -0.31
SMAD4-205ENST00000588745 TMEM63CQ9P1W3 806 aa13.1□□□□□ -0.31
SMAD4-205ENST00000588745 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 ESYT2A0FGR8 921 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 SPTLC2O15270 562 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 ME1P48163 572 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
SMAD4-205ENST00000588745 PTPAQ15257 358 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
SMAD4-205ENST00000588745 BICD2Q8TD16 824 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
SMAD4-205ENST00000588745 ZMYND12Q9H0C1 365 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 VCPKMTQ9H867 229 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 ZNF112Q9UJU3 913 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 NOL7Q9UMY1 257 aaKnown RBP13.09□□□□□ -0.31
SMAD4-205ENST00000588745 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
SMAD4-205ENST00000588745 M0R2N6 131 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 ZBTB5O15062 677 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 INPP5BP32019 993 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 SLC39A14Q15043 492 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 SYDE2Q5VT97 1194 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 PRAMEF18Q5VWM3 479 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 CCDC84Q86UT8 332 aaPredicted RBP13.08□□□□□ -0.31
SMAD4-205ENST00000588745 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.31
SMAD4-205ENST00000588745 WDR90Q96KV7 1748 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 FEZ1Q99689 392 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.31
SMAD4-205ENST00000588745 C6orf50Q9HD87 102 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 PCDHA7Q9UN72 937 aa13.08□□□□□ -0.31
SMAD4-205ENST00000588745 GLTPD2A6NH11 291 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 TMEM232C9JQI7 657 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 ADAMTS3O15072 1205 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 PPP1R11O60927 126 aaPredicted RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 PPP6R2O75170 966 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 GNA11P29992 359 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 CDC37Q16543 378 aaPredicted RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 ZSCAN23Q3MJ62 389 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 SUPT20HL1Q3ZLR7 823 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 CCDC183Q5T5S1 534 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 PIK3AP1Q6ZUJ8 805 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 USP50Q70EL3 339 aaPredicted RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 SCYL3Q8IZE3 742 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 JMYQ8N9B5 988 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 WRNIP1Q96S55 665 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 PCDHA6Q9UN73 950 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 CEP131Q9UPN4 1083 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 PCDHA8Q9Y5H6 950 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 MORC2Q9Y6X9 1032 aaPredicted RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 POLR2AP24928 1970 aaKnown RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 OTOFQ9HC10 1997 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 A0A1W2PQ27 194 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 A0A1W2PQ64 194 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 TRIM75PA6NK02 468 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 LIG1P18858 919 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 EPHX2P34913 555 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 STAT2P52630 851 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 ZYXQ15942 572 aaKnown RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 ADALQ6DHV7 355 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 COA7Q96BR5 231 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 KLRG1Q96E93 195 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.07□□□□□ -0.32
SMAD4-205ENST00000588745 PCDHB6Q9Y5E3 794 aa13.07□□□□□ -0.32
SMAD4-205ENST00000588745 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 IQCA1LA6NCM1 817 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 PLA2G6O60733 806 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 BMP15O95972 392 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 ADCY7P51828 1080 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 ZNF445P59923 1031 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 TTC38Q5R3I4 469 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 NOL9Q5SY16 702 aaKnown RBP13.06□□□□□ -0.32
SMAD4-205ENST00000588745 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
SMAD4-205ENST00000588745 CCDC73Q6ZRK6 1079 aa13.06□□□□□ -0.32
SMAD4-205ENST00000588745 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms