RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 FERMT3Q86UX7 667 aa12.17□□□□□ -0.46
NEDD4L-224ENST00000588712 MTMR8Q96EF0 704 aa12.17□□□□□ -0.46
NEDD4L-224ENST00000588712 JMJD4Q9H9V9 463 aa12.17□□□□□ -0.46
NEDD4L-224ENST00000588712 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
NEDD4L-224ENST00000588712 ZHX2Q9Y6X8 837 aa12.17□□□□□ -0.46
NEDD4L-224ENST00000588712 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 FOSBP53539 338 aa12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 SKOR2Q2VWA4 1001 aaPredicted RBP12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 SYDE2Q5VT97 1194 aa12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 HEATR3Q7Z4Q2 680 aa12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 NOSTRINQ8IVI9 506 aa12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 DIS3L2Q8IYB7 885 aaKnown RBP12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 PIGSQ96S52 555 aa12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 VPS54Q9P1Q0 977 aa12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 SSC5DA1L4H1 1573 aa12.16□□□□□ -0.46
NEDD4L-224ENST00000588712 ESYT2A0FGR8 921 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 DEKP35659 375 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 PPATQ06203 517 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 SPP2Q13103 211 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 MCTP2Q6DN12 878 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 OTUD7BQ6GQQ9 843 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 HOMER1Q86YM7 354 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 C12orf42Q96LP6 360 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 NAPAP54920 295 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 VGLL4Q14135 290 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 RILPL1Q5EBL4 403 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 TTBK2Q6IQ55 1244 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 ERO1BQ86YB8 467 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 PRPF38AQ8NAV1 312 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 DAGLBQ8NCG7 672 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 ZMYND12Q9H0C1 365 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 PCDHA4Q9UN74 947 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 AFG3L2Q9Y4W6 797 aa12.15□□□□□ -0.46
NEDD4L-224ENST00000588712 STXBP3O00186 592 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 SLC16A2P36021 539 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 DNM1Q05193 864 aaKnown RBP12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 MTMR2Q13614 643 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 PRKG1Q13976 671 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 FAM83BQ5T0W9 1011 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 PIBF1Q8WXW3 757 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 KCNJ14Q9UNX9 436 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 BTBD18B2RXH4 712 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 UBE2Q2LH0YL09 131 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 CXCL11O14625 94 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 MRPL12P52815 198 aaKnown RBP12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 ZYXQ15942 572 aaKnown RBP12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 CDC37Q16543 378 aaPredicted RBP12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 SLC35G1Q2M3R5 365 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 MYSM1Q5VVJ2 828 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 MAP1SQ66K74 1059 aaPredicted RBP12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 GJB4Q9NTQ9 266 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 PRR12Q9ULL5 1215 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 NOL7Q9UMY1 257 aaKnown RBP12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 SNCAIPQ9Y6H5 919 aa12.14□□□□□ -0.47
NEDD4L-224ENST00000588712 ELP1O95163 1332 aa12.13□□□□□ -0.47
NEDD4L-224ENST00000588712 BAZ2BQ9UIF8 2168 aaKnown RBP12.13□□□□□ -0.47
NEDD4L-224ENST00000588712 SMCO2A6NFE2 343 aa12.13□□□□□ -0.47
NEDD4L-224ENST00000588712 TRAPPC10P48553 1259 aa12.13□□□□□ -0.47
NEDD4L-224ENST00000588712 RASGRP2Q7LDG7 609 aa12.13□□□□□ -0.47
NEDD4L-224ENST00000588712 FBXO11Q86XK2 927 aa12.13□□□□□ -0.47
NEDD4L-224ENST00000588712 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
NEDD4L-224ENST00000588712 NUP88Q99567 741 aaPredicted RBP12.13□□□□□ -0.47
NEDD4L-224ENST00000588712 SPDYE5A6NIY4 337 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 LDLRAD1Q5T700 205 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 SPATA32Q96LK8 384 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 SLF1Q9BQI6 1058 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 POLR3EQ9NVU0 708 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 RTEL1Q9NZ71 1219 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 CEP131Q9UPN4 1083 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 PCDHA1Q9Y5I3 950 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 PRPF40AO75400 957 aaKnown RBP12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 YEATS4O95619 227 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 BMP15O95972 392 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 VCAM1P19320 739 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 ADCY7P51828 1080 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 PPIL2Q13356 520 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 FOXD4L6Q3SYB3 417 aaPredicted RBP12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 FOXD4L3Q6VB84 417 aaPredicted RBP12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 JMYQ8N9B5 988 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 RANBP17Q9H2T7 1088 aaKnown RBP12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 HOXC10Q9NYD6 342 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms