RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
HDAC5-208ENST00000588419 PDLIM7Q9NR12 457 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 MTMR10Q9NXD2 777 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 NYAP2Q9P242 653 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 DLL1O00548 723 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 ZBED4O75132 1171 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 TSPY3P0CV98 308 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 TSPY8P0CW00 308 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 AKR1A1P14550 325 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 IKQ13123 557 aaPredicted RBP16.34■□□□□ 0.21
HDAC5-208ENST00000588419 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
HDAC5-208ENST00000588419 SH3RF1Q7Z6J0 888 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 IFNL3Q8IZI9 196 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 OTUD7AQ8TE49 926 aaPredicted RBP16.34■□□□□ 0.21
HDAC5-208ENST00000588419 NAPBQ9H115 298 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 HOMER2Q9NSB8 354 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 RIPK3Q9Y572 518 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 COL6A3P12111 3177 aa16.34■□□□□ 0.21
HDAC5-208ENST00000588419 LRRC37A2A6NM11 1700 aa16.33■□□□□ 0.21
HDAC5-208ENST00000588419 ERC2O15083 957 aa16.33■□□□□ 0.2
HDAC5-208ENST00000588419 PQBP1O60828 265 aaKnown RBP16.33■□□□□ 0.2
HDAC5-208ENST00000588419 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
HDAC5-208ENST00000588419 STXBP5LQ9Y2K9 1186 aa16.33■□□□□ 0.2
HDAC5-208ENST00000588419 A0A1W2PQ45 241 aaPredicted RBP16.32■□□□□ 0.2
HDAC5-208ENST00000588419 A0A1W2PQY0 241 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
HDAC5-208ENST00000588419 TTLL1O95922 423 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 ZNF865P0CJ78 1059 aaPredicted RBP16.32■□□□□ 0.2
HDAC5-208ENST00000588419 TLE2Q04725 743 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 SNX17Q15036 470 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 SHHQ15465 462 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 C9orf50Q5SZB4 431 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 ZNF697Q5TEC3 545 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 TTC41PQ6P2S7 1318 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 ANKRD35Q8N283 1001 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 PRPF38AQ8NAV1 312 aaKnown RBP16.32■□□□□ 0.2
HDAC5-208ENST00000588419 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 PHF24Q9UPV7 400 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 MTMR7Q9Y216 660 aa16.32■□□□□ 0.2
HDAC5-208ENST00000588419 DIS3Q9Y2L1 958 aaKnown RBP16.32■□□□□ 0.2
HDAC5-208ENST00000588419 SYNRGQ9UMZ2 1314 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 IGKV6D-41A0A0C4DH26 115 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 TRIM43BA6NCK2 446 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
HDAC5-208ENST00000588419 CLTBP09497 229 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 PDE4BQ07343 736 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 SLFN13Q68D06 897 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 TRIM43Q96BQ3 446 aaPredicted RBP16.31■□□□□ 0.2
HDAC5-208ENST00000588419 MTMR4Q9NYA4 1195 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 ZBTB47Q9UFB7 747 aaPredicted RBP16.31■□□□□ 0.2
HDAC5-208ENST00000588419 FEM1BQ9UK73 627 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 LCTP09848 1927 aa16.31■□□□□ 0.2
HDAC5-208ENST00000588419 BMP3P12645 472 aa16.3■□□□□ 0.2
HDAC5-208ENST00000588419 TFAP4Q01664 338 aa16.3■□□□□ 0.2
HDAC5-208ENST00000588419 PPARAQ07869 468 aa16.3■□□□□ 0.2
HDAC5-208ENST00000588419 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
HDAC5-208ENST00000588419 FAM184BQ9ULE4 1060 aa16.3■□□□□ 0.2
HDAC5-208ENST00000588419 PCDHB15Q9Y5E8 787 aa16.3■□□□□ 0.2
HDAC5-208ENST00000588419 PLIN4Q96Q06 1357 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 SYNGAP1Q96PV0 1343 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 ADAMTS4O75173 837 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 C6orf222P0C671 652 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-208ENST00000588419 RAG1P15918 1043 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 MX1P20591 662 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 GUCD1Q96NT3 240 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 SLC38A10Q9HBR0 1119 aa16.29■□□□□ 0.2
HDAC5-208ENST00000588419 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-208ENST00000588419 MYADML2A6NDP7 307 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 TSPY2A6NKD2 308 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
HDAC5-208ENST00000588419 STAT2P52630 851 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 ACLYP53396 1101 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 IRX5P78411 483 aaPredicted RBP16.28■□□□□ 0.2
HDAC5-208ENST00000588419 ZMYM1Q5SVZ6 1142 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 GMCL1P1Q8NEA9 526 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 VTI1AQ96AJ9 217 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 RNPC3Q96LT9 517 aaKnown RBP16.28■□□□□ 0.2
HDAC5-208ENST00000588419 TMEM39AQ9NV64 488 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 TACC3Q9Y6A5 838 aa16.28■□□□□ 0.2
HDAC5-208ENST00000588419 DNAJC25-GNG10A0A024R161 153 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 ITGB8P26012 769 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 SLC1A4P43007 532 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 SNAP25P60880 206 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 ACVR2BQ13705 512 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 KCNA10Q16322 511 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 C1orf53Q5VUE5 145 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 KCTD1Q719H9 257 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 ARMCX2Q7L311 632 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 RASGRP2Q7LDG7 609 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
HDAC5-208ENST00000588419 CHST13Q8NET6 341 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms