RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 IGKV6D-41A0A0C4DH26 115 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 GSG1L2A8MUP6 293 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 HMMRO75330 724 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 GRIN2CQ14957 1233 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 SNRNP48Q6IEG0 339 aaKnown RBP14.28□□□□□ -0.12
BRCA1-225ENST00000586385 MAMDC4Q6UXC1 1216 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 C16orf59Q7L2K0 433 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 TTC28Q96AY4 2481 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 TOX2Q96NM4 488 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 SLF1Q9BQI6 1058 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 TSEN34Q9BSV6 310 aaKnown RBP14.28□□□□□ -0.12
BRCA1-225ENST00000586385 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.12
BRCA1-225ENST00000586385 NYAP2Q9P242 653 aa14.28□□□□□ -0.12
BRCA1-225ENST00000586385 ZNFX1Q9P2E3 1918 aaKnown RBP14.28□□□□□ -0.12
BRCA1-225ENST00000586385 SYNGAP1Q96PV0 1343 aa14.27□□□□□ -0.12
BRCA1-225ENST00000586385 TMEM265A0A087WTH1 108 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 F5H6K3 240 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 CTAGE5O15320 804 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 RAD21O60216 631 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.13
BRCA1-225ENST00000586385 FOSL2P15408 326 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 RAG1P15918 1043 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 COPB2P35606 906 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 CDK7P50613 346 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 FPGSQ05932 587 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 KLRC3Q07444 240 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 KCNA10Q16322 511 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.27□□□□□ -0.13
BRCA1-225ENST00000586385 STK11IPQ8N1F8 1099 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 MSL3Q8N5Y2 521 aaKnown RBP14.27□□□□□ -0.13
BRCA1-225ENST00000586385 OSBP2Q969R2 916 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 EPB41L4AQ9HCS5 686 aaPredicted RBP14.27□□□□□ -0.13
BRCA1-225ENST00000586385 TMEM39AQ9NV64 488 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 DDX19BQ9UMR2 479 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 CNPY2Q9Y2B0 182 aa14.27□□□□□ -0.13
BRCA1-225ENST00000586385 ATP2A1O14983 1001 aa14.26□□□□□ -0.13
BRCA1-225ENST00000586385 DNAJB2P25686 324 aa14.26□□□□□ -0.13
BRCA1-225ENST00000586385 CST5P28325 142 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-225ENST00000586385 KATNBL1Q9H079 304 aa14.26□□□□□ -0.13
BRCA1-225ENST00000586385 STARD7Q9NQZ5 370 aa14.26□□□□□ -0.13
BRCA1-225ENST00000586385 ARPP21Q9UBL0 812 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-225ENST00000586385 ZHX1Q9UKY1 873 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-225ENST00000586385 FAM184BQ9ULE4 1060 aa14.26□□□□□ -0.13
BRCA1-225ENST00000586385 MOXD2PA6NHM9 499 aa14.25□□□□□ -0.13
BRCA1-225ENST00000586385 DUSP11O75319 330 aaKnown RBP14.25□□□□□ -0.13
BRCA1-225ENST00000586385 TIMP1P01033 207 aa14.25□□□□□ -0.13
BRCA1-225ENST00000586385 RASIP1Q5U651 963 aa14.25□□□□□ -0.13
BRCA1-225ENST00000586385 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-225ENST00000586385 AMOTL1Q8IY63 956 aa14.25□□□□□ -0.13
BRCA1-225ENST00000586385 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.25□□□□□ -0.136e-6■■□□□ 12.9
BRCA1-225ENST00000586385 UPF3AQ9H1J1 476 aaKnown RBP14.25□□□□□ -0.13
BRCA1-225ENST00000586385 SLC38A10Q9HBR0 1119 aa14.25□□□□□ -0.13
BRCA1-225ENST00000586385 RAVER2Q9HCJ3 691 aaKnown RBP14.25□□□□□ -0.13
BRCA1-225ENST00000586385 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-225ENST00000586385 MYH8P13535 1937 aa14.25□□□□□ -0.13
BRCA1-225ENST00000586385 PLXNA1Q9UIW2 1896 aa14.25□□□□□ -0.13
BRCA1-225ENST00000586385 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-225ENST00000586385 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-225ENST00000586385 GRXCR1A8MXD5 290 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 DCDC2CA8MYV0 355 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 PBX2P40425 430 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 ACVR2BQ13705 512 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 TMEM240Q5SV17 173 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 C20orf194Q5TEA3 1177 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 TSHZ3Q63HK5 1081 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 CPXCR1Q8N123 301 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
BRCA1-225ENST00000586385 NUP133Q8WUM0 1156 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 DDX11Q96FC9 970 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 PRDM6Q9NQX0 595 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
BRCA1-225ENST00000586385 ASTN1O14525 1302 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 ELP1O95163 1332 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 MINDY4BA8MYZ0 360 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 PRDM1O75626 825 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 ASGR1P07306 291 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 MS4A1P11836 297 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 PTGS1P23219 599 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 GJA9P57773 515 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 NKX3-2P78367 333 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 CNTN2Q02246 1040 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 MFSD5Q6N075 450 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 ZSCAN25Q6NSZ9 544 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 GIMAP6Q6P9H5 292 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 KBTBD3Q8NAB2 608 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 MKL1Q969V6 931 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 KIFC2Q96AC6 838 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 LRRCC1Q9C099 1032 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 ZNF576Q9H609 170 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 MTMR4Q9NYA4 1195 aa14.23□□□□□ -0.13
BRCA1-225ENST00000586385 DDX49Q9Y6V7 483 aaKnown RBP14.23□□□□□ -0.13
BRCA1-225ENST00000586385 M0R2C6 588 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 C6orf222P0C671 652 aaPredicted RBP14.22□□□□□ -0.13
BRCA1-225ENST00000586385 CSF2RAP15509 400 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 SLC4A3P48751 1232 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms