RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 H3BQV1 296 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 GJA5P36382 358 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 AKAP17AQ02040 695 aaKnown RBP16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 SH3D19Q5HYK7 790 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 IFFO2Q5TF58 517 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 SYDE2Q5VT97 1194 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 ARMC9Q7Z3E5 817 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 HOMER1Q86YM7 354 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 WASF1Q92558 559 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 PHF20Q9BVI0 1012 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 CSADQ9Y600 493 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 TCHHQ07283 1943 aa16.56■□□□□ 0.24
SMARCD2-211ENST00000584483 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 MYH15Q9Y2K3 1946 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 SPDYE5A6NIY4 337 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 STXBP3O00186 592 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 PLA2G6O60733 806 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 CELF2O95319 508 aaKnown RBP16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 VCAM1P19320 739 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 HMGCS2P54868 508 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 KIF23Q02241 960 aaPredicted RBP16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 FOXD4L6Q3SYB3 417 aaPredicted RBP16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 FOXD4L3Q6VB84 417 aaPredicted RBP16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 CLEC17AQ6ZS10 378 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 ERO1BQ86YB8 467 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 RGS22Q8NE09 1264 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 RRP36Q96EU6 259 aaKnown RBP16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 GBA2Q9HCG7 927 aaPredicted RBP16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 PRR12Q9ULL5 1215 aa16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
SMARCD2-211ENST00000584483 PNMA6FA0A0J9YX94 578 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 C19orf81C9J6K1 198 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 IRF6O14896 467 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 WDR46O15213 610 aaKnown RBP16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 MMP1P03956 469 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 PDIA4P13667 645 aaKnown RBP16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 PPATQ06203 517 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 LPAR1Q92633 364 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 COA7Q96BR5 231 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 LOC285556D6RIA3 1793 aa16.54■□□□□ 0.24
SMARCD2-211ENST00000584483 BTBD18B2RXH4 712 aa16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 ZBTB5O15062 677 aa16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 BAG4O95429 457 aaKnown RBP16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 TAL1P17542 331 aaPredicted RBP16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 USP14P54578 494 aa16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 MOGSQ13724 837 aa16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 NOM1Q5C9Z4 860 aaKnown RBP16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 OPTNQ96CV9 577 aa16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 RPAP3Q9H6T3 665 aaPredicted RBP16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 BARHL2Q9NY43 387 aa16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 FEM1BQ9UK73 627 aa16.53■□□□□ 0.24
SMARCD2-211ENST00000584483 PASKQ96RG2 1323 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 STAT2P52630 851 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 FKBP1BP68106 108 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 NR5A1Q13285 461 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 CDC37Q16543 378 aaPredicted RBP16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 MCTP1Q6DN14 999 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 HEATR3Q7Z4Q2 680 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 TNFRSF25Q93038 417 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 KCNH4Q9UQ05 1017 aa16.52■□□□□ 0.24
SMARCD2-211ENST00000584483 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 PPIL2Q13356 520 aa16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 TRIM29Q14134 588 aa16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 EARS2Q5JPH6 523 aaKnown RBP16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 TREML2Q5T2D2 321 aa16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 PRRT2Q7Z6L0 340 aaPredicted RBP16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 FAM160B2Q86V87 743 aa16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 DIS3L2Q8IYB7 885 aaKnown RBP16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 SLC10A4Q96EP9 437 aa16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 WNK4Q96J92 1243 aa16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 RANBP17Q9H2T7 1088 aaKnown RBP16.51■□□□□ 0.23
SMARCD2-211ENST00000584483 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 UNCXA6NJT0 531 aa16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 M0R2N6 131 aa16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 CXCL11O14625 94 aa16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 DNM1Q05193 864 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 POTEEQ6S8J3 1075 aa16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 CATSPERGQ6ZRH7 1159 aa16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 C2orf69Q8N8R5 385 aa16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 RBM46Q8TBY0 533 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 ZSCAN16Q9H4T2 348 aaPredicted RBP16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 SEC63Q9UGP8 760 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-211ENST00000584483 COL11A1P12107 1806 aaPredicted RBP16.49■□□□□ 0.23
SMARCD2-211ENST00000584483 ZNF536O15090 1300 aa16.49■□□□□ 0.23
SMARCD2-211ENST00000584483 NLRP5P59047 1200 aa16.49■□□□□ 0.23
SMARCD2-211ENST00000584483 NFKBIBQ15653 356 aa16.49■□□□□ 0.23
SMARCD2-211ENST00000584483 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms