RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 TEX13BQ9BXU2 312 aa25.39■■□□□ 1.66
PPP4R1-228ENST00000584074 NBPF3Q9H094 633 aa25.39■■□□□ 1.66
PPP4R1-228ENST00000584074 SLC5A4Q9NY91 659 aa25.39■■□□□ 1.66
PPP4R1-228ENST00000584074 ISY1Q9ULR0 285 aaKnown RBP25.39■■□□□ 1.66
PPP4R1-228ENST00000584074 RIPK3Q9Y572 518 aa25.39■■□□□ 1.66
PPP4R1-228ENST00000584074 COL11A1P12107 1806 aaPredicted RBP25.39■■□□□ 1.65
PPP4R1-228ENST00000584074 TMEM232C9JQI7 657 aa25.38■■□□□ 1.65
PPP4R1-228ENST00000584074 PGK2P07205 417 aa25.38■■□□□ 1.65
PPP4R1-228ENST00000584074 MCCP23508 829 aa25.38■■□□□ 1.65
PPP4R1-228ENST00000584074 CNGA1P29973 690 aa25.38■■□□□ 1.65
PPP4R1-228ENST00000584074 KCTD2Q14681 263 aa25.38■■□□□ 1.65
PPP4R1-228ENST00000584074 CPXCR1Q8N123 301 aa25.38■■□□□ 1.65
PPP4R1-228ENST00000584074 GMCL1Q96IK5 515 aa25.38■■□□□ 1.65
PPP4R1-228ENST00000584074 SLC38A10Q9HBR0 1119 aa25.38■■□□□ 1.65
PPP4R1-228ENST00000584074 HIP1O00291 1037 aa25.37■■□□□ 1.65
PPP4R1-228ENST00000584074 COPB2P35606 906 aa25.37■■□□□ 1.65
PPP4R1-228ENST00000584074 SLC4A3P48751 1232 aa25.37■■□□□ 1.65
PPP4R1-228ENST00000584074 TBC1D10CQ8IV04 446 aa25.37■■□□□ 1.65
PPP4R1-228ENST00000584074 MAML3Q96JK9 1138 aa25.37■■□□□ 1.65
PPP4R1-228ENST00000584074 RAVER2Q9HCJ3 691 aaKnown RBP25.37■■□□□ 1.65
PPP4R1-228ENST00000584074 CTDP1Q9Y5B0 961 aaPredicted RBP25.37■■□□□ 1.65
PPP4R1-228ENST00000584074 ATP2A1O14983 1001 aa25.36■■□□□ 1.65
PPP4R1-228ENST00000584074 CYBAP13498 195 aa25.36■■□□□ 1.65
PPP4R1-228ENST00000584074 GSPT1P15170 499 aaKnown RBP25.36■■□□□ 1.65
PPP4R1-228ENST00000584074 SLC1A4P43007 532 aa25.36■■□□□ 1.65
PPP4R1-228ENST00000584074 NOVP48745 357 aa25.36■■□□□ 1.65
PPP4R1-228ENST00000584074 TTC22Q5TAA0 569 aa25.36■■□□□ 1.65
PPP4R1-228ENST00000584074 RASGRP2Q7LDG7 609 aa25.36■■□□□ 1.65
PPP4R1-228ENST00000584074 DDX20Q9UHI6 824 aaKnown RBP25.36■■□□□ 1.65
PPP4R1-228ENST00000584074 EVI5O60447 810 aa25.35■■□□□ 1.65
PPP4R1-228ENST00000584074 PRAMEF19Q5SWL8 479 aa25.35■■□□□ 1.65
PPP4R1-228ENST00000584074 AKNAD1Q5T1N1 836 aa25.35■■□□□ 1.65
PPP4R1-228ENST00000584074 MFSD6Q6ZSS7 791 aa25.35■■□□□ 1.65
PPP4R1-228ENST00000584074 KCTD1Q719H9 257 aa25.35■■□□□ 1.65
PPP4R1-228ENST00000584074 C11orf49Q9H6J7 331 aa25.35■■□□□ 1.65
PPP4R1-228ENST00000584074 MTMR7Q9Y216 660 aa25.35■■□□□ 1.65
PPP4R1-228ENST00000584074 NR2E3Q9Y5X4 410 aa25.35■■□□□ 1.65
PPP4R1-228ENST00000584074 STAT2P52630 851 aa25.34■■□□□ 1.65
PPP4R1-228ENST00000584074 IKQ13123 557 aaPredicted RBP25.34■■□□□ 1.65
PPP4R1-228ENST00000584074 ZNF792Q3KQV3 632 aa25.34■■□□□ 1.65
PPP4R1-228ENST00000584074 CHURC1Q8WUH1 139 aa25.34■■□□□ 1.65
PPP4R1-228ENST00000584074 STAG1Q8WVM7 1258 aa25.34■■□□□ 1.65
PPP4R1-228ENST00000584074 ZNF213O14771 459 aa25.33■■□□□ 1.65
PPP4R1-228ENST00000584074 RCSD1Q6JBY9 416 aa25.33■■□□□ 1.65
PPP4R1-228ENST00000584074 FAM160B2Q86V87 743 aa25.33■■□□□ 1.65
PPP4R1-228ENST00000584074 TCP11L1Q9NUJ3 509 aa25.33■■□□□ 1.65
PPP4R1-228ENST00000584074 COLQQ9Y215 455 aaPredicted RBP25.33■■□□□ 1.65
PPP4R1-228ENST00000584074 MSCO60682 206 aa25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 PCP11498 1178 aaKnown RBP25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 OAZ1P54368 228 aa25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 TMEM47Q9BQJ4 181 aa25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 IL25Q9H293 177 aa25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 RNF41Q9H4P4 317 aaPredicted RBP25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 DIS3Q9Y2L1 958 aaKnown RBP25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 PFASO15067 1338 aa25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 NEDD4P46934 1319 aa25.32■■□□□ 1.64
PPP4R1-228ENST00000584074 TOP1P11387 765 aaKnown RBP25.31■■□□□ 1.64
PPP4R1-228ENST00000584074 COL6A1P12109 1028 aa25.31■■□□□ 1.64
PPP4R1-228ENST00000584074 HABP4Q5JVS0 413 aaKnown RBP25.31■■□□□ 1.64
PPP4R1-228ENST00000584074 ANO1Q5XXA6 986 aa25.31■■□□□ 1.64
PPP4R1-228ENST00000584074 TINF2Q9BSI4 451 aa25.31■■□□□ 1.64
PPP4R1-228ENST00000584074 SEPT4O43236 478 aa25.3■■□□□ 1.64
PPP4R1-228ENST00000584074 PLA2G6O60733 806 aa25.3■■□□□ 1.64
PPP4R1-228ENST00000584074 FDX1P10109 184 aa25.3■■□□□ 1.64
PPP4R1-228ENST00000584074 DCAF4Q8WV16 495 aa25.3■■□□□ 1.64
PPP4R1-228ENST00000584074 DDX11Q96FC9 970 aa25.3■■□□□ 1.64
PPP4R1-228ENST00000584074 DSCC1Q9BVC3 393 aa25.3■■□□□ 1.64
PPP4R1-228ENST00000584074 HOMER2Q9NSB8 354 aa25.3■■□□□ 1.64
PPP4R1-228ENST00000584074 CEP290O15078 2479 aa25.29■■□□□ 1.64
PPP4R1-228ENST00000584074 DNAJC25-GNG10A0A024R161 153 aa25.29■■□□□ 1.64
PPP4R1-228ENST00000584074 SNAP25P60880 206 aa25.29■■□□□ 1.64
PPP4R1-228ENST00000584074 CCDC96Q2M329 555 aa25.29■■□□□ 1.64
PPP4R1-228ENST00000584074 AGBL1Q96MI9 1066 aa25.29■■□□□ 1.64
PPP4R1-228ENST00000584074 PRR12Q9ULL5 1215 aa25.29■■□□□ 1.64
PPP4R1-228ENST00000584074 ZNF536O15090 1300 aa25.29■■□□□ 1.64
PPP4R1-228ENST00000584074 CHRDL2Q6WN34 429 aa25.28■■□□□ 1.64
PPP4R1-228ENST00000584074 C7orf61Q8IZ16 206 aa25.28■■□□□ 1.64
PPP4R1-228ENST00000584074 CHST13Q8NET6 341 aa25.28■■□□□ 1.64
PPP4R1-228ENST00000584074 ESR2Q92731 530 aa25.28■■□□□ 1.64
PPP4R1-228ENST00000584074 ZKSCAN3Q9BRR0 538 aa25.28■■□□□ 1.64
PPP4R1-228ENST00000584074 FBXO40Q9UH90 709 aa25.28■■□□□ 1.64
PPP4R1-228ENST00000584074 DNAH12Q6ZR08 3092 aa25.28■■□□□ 1.64
PPP4R1-228ENST00000584074 SLC34A2O95436 690 aa25.27■■□□□ 1.64
PPP4R1-228ENST00000584074 TAL1P17542 331 aaPredicted RBP25.27■■□□□ 1.64
PPP4R1-228ENST00000584074 TTBK2Q6IQ55 1244 aa25.27■■□□□ 1.64
PPP4R1-228ENST00000584074 CCDC174Q6PII3 467 aa25.27■■□□□ 1.64
PPP4R1-228ENST00000584074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.27■■□□□ 1.64
PPP4R1-228ENST00000584074 ANKRD35Q8N283 1001 aa25.27■■□□□ 1.64
PPP4R1-228ENST00000584074 TTC14Q96N46 770 aa25.27■■□□□ 1.64
PPP4R1-228ENST00000584074 RANBP2P49792 3224 aaKnown RBP25.27■■□□□ 1.64
PPP4R1-228ENST00000584074 SLC16A2P36021 539 aa25.26■■□□□ 1.63
PPP4R1-228ENST00000584074 IMMTQ16891 758 aaKnown RBP25.26■■□□□ 1.63
PPP4R1-228ENST00000584074 GPCPD1Q9NPB8 672 aa25.26■■□□□ 1.63
PPP4R1-228ENST00000584074 NRBP1Q9UHY1 535 aa25.26■■□□□ 1.63
PPP4R1-228ENST00000584074 CTNNA3Q9UI47 895 aa25.26■■□□□ 1.63
PPP4R1-228ENST00000584074 ZNFX1Q9P2E3 1918 aaKnown RBP25.25■■□□□ 1.63
PPP4R1-228ENST00000584074 DNM1LO00429 736 aa25.25■■□□□ 1.63
PPP4R1-228ENST00000584074 KDM4AO75164 1064 aa25.25■■□□□ 1.63
PPP4R1-228ENST00000584074 CHMLP26374 656 aa25.25■■□□□ 1.63
PPP4R1-228ENST00000584074 GJC2Q5T442 439 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms