RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 CHURC1Q8WUH1 139 aa19.62■□□□□ 0.73
SREBF1-219ENST00000580540 IL25Q9H293 177 aa19.62■□□□□ 0.73
SREBF1-219ENST00000580540 RAVER2Q9HCJ3 691 aaKnown RBP19.62■□□□□ 0.73
SREBF1-219ENST00000580540 SLC5A4Q9NY91 659 aa19.62■□□□□ 0.73
SREBF1-219ENST00000580540 CTNNA3Q9UI47 895 aa19.62■□□□□ 0.73
SREBF1-219ENST00000580540 ZNF214Q9UL59 606 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-219ENST00000580540 NEDD4P46934 1319 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 PCP11498 1178 aaKnown RBP19.61■□□□□ 0.73
SREBF1-219ENST00000580540 CHMLP26374 656 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 CCND3P30281 292 aaPredicted RBP19.61■□□□□ 0.73
SREBF1-219ENST00000580540 CYP2C19P33261 490 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 KCTD2Q14681 263 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 CCDC96Q2M329 555 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 MAP3K21Q5TCX8 1036 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 RASGRP2Q7LDG7 609 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 ESR2Q92731 530 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 GMCL1Q96IK5 515 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 ZKSCAN3Q9BRR0 538 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 TEX13BQ9BXU2 312 aa19.61■□□□□ 0.73
SREBF1-219ENST00000580540 PGK2P07205 417 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 TOP1P11387 765 aaKnown RBP19.6■□□□□ 0.73
SREBF1-219ENST00000580540 CNGA1P29973 690 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 COPB2P35606 906 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 STAT2P52630 851 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 RCSD1Q6JBY9 416 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-219ENST00000580540 FAM160B2Q86V87 743 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 ABRAQ8N0Z2 381 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 DPF3Q92784 378 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 TMEM47Q9BQJ4 181 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 CRISPLD2Q9H0B8 497 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 TCP11L1Q9NUJ3 509 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 RIPK3Q9Y572 518 aa19.6■□□□□ 0.73
SREBF1-219ENST00000580540 RAD50Q92878 1312 aa19.59■□□□□ 0.73
SREBF1-219ENST00000580540 PRPF38BQ5VTL8 546 aaKnown RBP19.59■□□□□ 0.73
SREBF1-219ENST00000580540 SKAP1Q86WV1 359 aa19.59■□□□□ 0.73
SREBF1-219ENST00000580540 SLC38A10Q9HBR0 1119 aa19.59■□□□□ 0.73
SREBF1-219ENST00000580540 B4E1Z4 1266 aa19.58■□□□□ 0.72
SREBF1-219ENST00000580540 KDM4AO75164 1064 aa19.58■□□□□ 0.72
SREBF1-219ENST00000580540 SNAP25P60880 206 aa19.58■□□□□ 0.72
SREBF1-219ENST00000580540 DCAF4Q8WV16 495 aa19.58■□□□□ 0.72
SREBF1-219ENST00000580540 GPCPD1Q9NPB8 672 aa19.58■□□□□ 0.72
SREBF1-219ENST00000580540 MKI67P46013 3256 aaKnown RBP19.57■□□□□ 0.72
SREBF1-219ENST00000580540 CAPN2P17655 700 aa19.57■□□□□ 0.72
SREBF1-219ENST00000580540 NOVP48745 357 aa19.57■□□□□ 0.72
SREBF1-219ENST00000580540 OLFML2BQ68BL8 750 aa19.57■□□□□ 0.72
SREBF1-219ENST00000580540 CCDC174Q6PII3 467 aa19.57■□□□□ 0.72
SREBF1-219ENST00000580540 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
SREBF1-219ENST00000580540 PAWRQ96IZ0 340 aaKnown RBP19.57■□□□□ 0.72
SREBF1-219ENST00000580540 TTC14Q96N46 770 aa19.57■□□□□ 0.72
SREBF1-219ENST00000580540 HOMER2Q9NSB8 354 aa19.57■□□□□ 0.72
SREBF1-219ENST00000580540 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-219ENST00000580540 FDX1P10109 184 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 SLC16A2P36021 539 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 PTH1RQ03431 593 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 TTBK2Q6IQ55 1244 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 UBE2Q1Q7Z7E8 422 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 IQCA1Q86XH1 822 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 DIS3LQ8TF46 1054 aaKnown RBP19.56■□□□□ 0.72
SREBF1-219ENST00000580540 MAML3Q96JK9 1138 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 HTATIP2Q9BUP3 242 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 KRT23Q9C075 422 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 PRR12Q9ULL5 1215 aa19.56■□□□□ 0.72
SREBF1-219ENST00000580540 ZNFX1Q9P2E3 1918 aaKnown RBP19.56■□□□□ 0.72
SREBF1-219ENST00000580540 ATP2A1O14983 1001 aa19.55■□□□□ 0.72
SREBF1-219ENST00000580540 OAZ1P54368 228 aa19.55■□□□□ 0.72
SREBF1-219ENST00000580540 PRAMEF19Q5SWL8 479 aa19.55■□□□□ 0.72
SREBF1-219ENST00000580540 NECAB2Q7Z6G3 386 aa19.55■□□□□ 0.72
SREBF1-219ENST00000580540 ANKRD35Q8N283 1001 aa19.55■□□□□ 0.72
SREBF1-219ENST00000580540 TRPV1Q8NER1 839 aa19.55■□□□□ 0.72
SREBF1-219ENST00000580540 AGBL1Q96MI9 1066 aa19.55■□□□□ 0.72
SREBF1-219ENST00000580540 OGDHLQ9ULD0 1010 aa19.55■□□□□ 0.72
SREBF1-219ENST00000580540 ZNF236Q9UL36 1845 aa19.54■□□□□ 0.72
SREBF1-219ENST00000580540 SGSM2O43147 1006 aa19.54■□□□□ 0.72
SREBF1-219ENST00000580540 PLA2G6O60733 806 aa19.54■□□□□ 0.72
SREBF1-219ENST00000580540 NEFLP07196 543 aa19.54■□□□□ 0.72
SREBF1-219ENST00000580540 CCDC178Q5BJE1 867 aa19.54■□□□□ 0.72
SREBF1-219ENST00000580540 ANKLE1Q8NAG6 615 aa19.54■□□□□ 0.72
SREBF1-219ENST00000580540 CNNM2Q9H8M5 875 aa19.54■□□□□ 0.72
SREBF1-219ENST00000580540 ZSWIM5Q9P217 1185 aa19.54■□□□□ 0.72
SREBF1-219ENST00000580540 DDX20Q9UHI6 824 aaKnown RBP19.54■□□□□ 0.72
SREBF1-219ENST00000580540 ALAS1P13196 640 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 CYBAP13498 195 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 ZNF792Q3KQV3 632 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 SYDE2Q5VT97 1194 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 ANO1Q5XXA6 986 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 LHX8Q68G74 356 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 DGKHQ86XP1 1220 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 CHST13Q8NET6 341 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 ZSCAN10Q96SZ4 725 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-219ENST00000580540 UBAC1Q9BSL1 405 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 KAT14Q9H8E8 782 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 FBXO40Q9UH90 709 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 U3KPZ7 1027 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-219ENST00000580540 LAMA4Q16363 1823 aa19.53■□□□□ 0.72
SREBF1-219ENST00000580540 PDHBP11177 359 aa19.52■□□□□ 0.72
SREBF1-219ENST00000580540 NT5C2P49902 561 aa19.52■□□□□ 0.72
SREBF1-219ENST00000580540 TRDNQ13061 729 aa19.52■□□□□ 0.72
SREBF1-219ENST00000580540 KIAA1211Q6ZU35 1233 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms