RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 LONRF3Q496Y0 759 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 NSFL1CQ9UNZ2 370 aaKnown RBP11.8□□□□□ -0.52
SEC22B-201ENST00000578049 GOLGA8QA0A0J9YX86 632 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 GOLGA8OA6NCC3 632 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 GOLGA8NF8WBI6 632 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 ZAP70P43403 619 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 HAUS2Q9NVX0 235 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 EIF3CLB5ME19 914 aaKnown RBP11.8□□□□□ -0.52
SEC22B-201ENST00000578049 GUCY2FP51841 1108 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 IL9RQ01113 521 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 FAM81BQ96LP2 452 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 PSMB7Q99436 277 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 EIF3CQ99613 913 aaKnown RBP11.8□□□□□ -0.52
SEC22B-201ENST00000578049 VPS54Q9P1Q0 977 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 SLFN14P0C7P3 912 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 SCG2P13521 617 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 SLC35F6Q8N357 371 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 CCDC89Q8N998 374 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 VPS37BQ9H9H4 285 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 SLFN12Q8IYM2 578 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 U2AF1L4Q8WU68 220 aaKnown RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 HAUS1Q96CS2 278 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 MRPL44Q9H9J2 332 aaKnown RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 INTS9Q9NV88 658 aaKnown RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 ADAMTS12P58397 1594 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 ZWINTO95229 277 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 GLE1Q53GS7 698 aaKnown RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 LINC00301Q8NCQ3 95 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 RTCBQ9Y3I0 505 aaKnown RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 THAP12O43422 761 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 LMNB1P20700 586 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 FAM26FQ5R3K3 315 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 NGLY1Q96IV0 654 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 NBPF9Q3BBW0 867 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 NEK8Q86SG6 692 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 MYCT1Q8N699 235 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 PBKQ96KB5 322 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 SUDS3Q9H7L9 328 aaPredicted RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 CLCN6P51797 869 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 ZBED6P86452 979 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 DYMQ7RTS9 669 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 SLC17A8Q8NDX2 589 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
SEC22B-201ENST00000578049 BLZF1Q9H2G9 400 aa11.79□□□□□ -0.52
SEC22B-201ENST00000578049 CASP14P31944 242 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 ABCC12Q96J65 1359 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 hCG_1984214I3L0E3 225 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 CIAO1O76071 339 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 GCNT3O95395 438 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 BPIFB4P59827 614 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
SEC22B-201ENST00000578049 TRIM11Q96F44 468 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 TUBGCP2Q9BSJ2 902 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 TBC1D8O95759 1140 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 PNMA6AP0CW24 399 aaPredicted RBP11.78□□□□□ -0.52
SEC22B-201ENST00000578049 SLC1A4P43007 532 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 ZMYM1Q5SVZ6 1142 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 ANKRD35Q8N283 1001 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 MAGEA9P43362 315 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 ATP1A2P50993 1020 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 GUCY2DQ02846 1103 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 SEMA3FQ13275 785 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 NCAPH2Q6IBW4 605 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 IFNL3Q8IZI9 196 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 PGRMC1O00264 195 aaKnown RBP11.78□□□□□ -0.52
SEC22B-201ENST00000578049 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
SEC22B-201ENST00000578049 ZNF622Q969S3 477 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEC22B-201ENST00000578049 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 TCIRG1Q13488 830 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 PPP1R21Q6ZMI0 780 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 CCDC13Q8IYE1 715 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 MYL10Q9BUA6 226 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 SCRN1Q12765 414 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 SEPT2Q15019 361 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.52
SEC22B-201ENST00000578049 ARHGEF18Q6ZSZ5 1173 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 ZNF354CQ86Y25 554 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 RASEFQ8IZ41 740 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 ANKRD42Q8N9B4 389 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 PARD6BQ9BYG5 372 aa11.77□□□□□ -0.52
SEC22B-201ENST00000578049 SMCO2A6NFE2 343 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 BTBD18B2RXH4 712 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 CRCPO75575 148 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 PDE6AP16499 860 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 CEBPAP49715 358 aaPredicted RBP11.77□□□□□ -0.53
SEC22B-201ENST00000578049 MAN2A1Q16706 1144 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 LRCH2Q5VUJ6 765 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 MMS22LQ6ZRQ5 1243 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 LRRC8CQ8TDW0 803 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 GDAP1L1Q96MZ0 367 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 TACO1Q9BSH4 297 aaKnown RBP11.77□□□□□ -0.53
SEC22B-201ENST00000578049 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 RAB20Q9NX57 234 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms