RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 U2AF1L4Q8WU68 220 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-210ENST00000572824 P2RX7Q99572 595 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-210ENST00000572824 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
NPLOC4-210ENST00000572824 SLC45A1Q9Y2W3 748 aa11.26□□□□□ -0.61
NPLOC4-210ENST00000572824 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
NPLOC4-210ENST00000572824 GNRH1P01148 92 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 GH2P01242 217 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 GJA8P48165 433 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 PLCD1P51178 756 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 SH3BP2P78314 561 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 FAM110CQ1W6H9 321 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 SLC44A5Q8NCS7 719 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 RHPN1Q8TCX5 695 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 ACER1Q8TDN7 264 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 ZNF512BQ96KM6 892 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 DEFB118Q96PH6 123 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 RIOK1Q9BRS2 568 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 PORCNQ9H237 461 aa11.25□□□□□ -0.61
NPLOC4-210ENST00000572824 CNMDO75829 334 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 FARP2O94887 1054 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 GJB1P08034 283 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 GUCY1A2P33402 732 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 SHMT1P34896 483 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 PRMT2P55345 433 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 BACE1P56817 501 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 SH3RF1Q7Z6J0 888 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 LCORLQ8N3X6 602 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 CRACR2BQ8N4Y2 399 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 SDR42E1Q8WUS8 393 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 TRIB2Q92519 343 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 FOXJ1Q92949 421 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 NOL10Q9BSC4 688 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 PI4KBQ9UBF8 816 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 HERC5Q9UII4 1024 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 GJD2Q9UKL4 321 aa11.24□□□□□ -0.61
NPLOC4-210ENST00000572824 CYP2D7A0A087X1C5 515 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 GOLIM4O00461 696 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 PRKAB2O43741 272 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 BAG3O95817 575 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 PDE6AP16499 860 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 CCL14Q16627 93 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 KIAA1755Q5JYT7 1200 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 ARHGAP9Q9BRR9 750 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 PAGR1Q9BTK6 254 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 WDR18Q9BV38 432 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 RBPJLQ9UBG7 517 aa11.23□□□□□ -0.61
NPLOC4-210ENST00000572824 TCRBV5S4A2TA0A5A2 114 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 CYP2B6P20813 491 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 HOXD10P28358 340 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 SLC19A1P41440 591 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 USP5P45974 858 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 WNT7BP56706 349 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 HERVK_113P62684 666 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 SKOR1P84550 965 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 TSHZ3Q63HK5 1081 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 BPHLQ86WA6 291 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 DPF3Q92784 378 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 DYNLL2Q96FJ2 89 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 ZNF532Q9HCE3 1301 aa11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 PAK6Q9NQU5 681 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-210ENST00000572824 SGPL1O95470 568 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 MAP4K4O95819 1239 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 ASNSP08243 561 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 UBXN2AP68543 259 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 IRX3P78415 501 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 SEPT2Q15019 361 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 RAB3GAP1Q15042 981 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 TATDN1Q6P1N9 297 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 ADAM32Q8TC27 787 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 ADAMTS19Q8TE59 1207 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 PAWRQ96IZ0 340 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 DHX36Q9H2U1 1008 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 ALG2Q9H553 416 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 ARMT1Q9H993 441 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 ZBTB40Q9NUA8 1239 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 MORF4L1Q9UBU8 362 aa11.21□□□□□ -0.61
NPLOC4-210ENST00000572824 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.62
NPLOC4-210ENST00000572824 A0A1W2PRG0 241 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 USP17L10C9JJH3 530 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 HLA-DOAP06340 250 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 VCAM1P19320 739 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 SOX11P35716 441 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 AGERQ15109 404 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 ZBTB33Q86T24 672 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 COA7Q96BR5 231 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 BOLA2Q9H3K6 86 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 AS3MTQ9HBK9 375 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 FLRT1Q9NZU1 646 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 BTBD7Q9P203 1132 aa11.2□□□□□ -0.62
NPLOC4-210ENST00000572824 MAGEB6P1A0A0J9YX57 407 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 SOX1O00570 391 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 TFRCP02786 760 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms