RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 RAD21O60216 631 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 FOSL2P15408 326 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 RAG1P15918 1043 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 RASA1P20936 1047 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 COPB2P35606 906 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 ACLYP53396 1101 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 FPGSQ05932 587 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 MAMDC4Q6UXC1 1216 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 AMOTL1Q8IY63 956 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 FGD4Q96M96 766 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 DDX19BQ9UMR2 479 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 CNPY2Q9Y2B0 182 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 MUC3AQ02505 3323 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
NPLOC4-206ENST00000571714 TMEM265A0A087WTH1 108 aa13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 NDUFB10O96000 172 aa13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 GRIN2CQ14957 1233 aa13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 TOX2Q96NM4 488 aa13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 STRBPQ96SI9 672 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 TSEN34Q9BSV6 310 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 STARD7Q9NQZ5 370 aa13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 TMEM39AQ9NV64 488 aa13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 TBX21Q9UL17 535 aa13.36□□□□□ -0.27
NPLOC4-206ENST00000571714 IGKV6D-41A0A0C4DH26 115 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 MOXD2PA6NHM9 499 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 F5H6K3 240 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 DNAJB2P25686 324 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 KLRC3Q07444 240 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 KCNA10Q16322 511 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 SBK1Q52WX2 424 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 MIER1Q8N108 512 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 USP38Q8NB14 1042 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 DDRGK1Q96HY6 314 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.35□□□□□ -0.272e-18■■■□□ 17.4
NPLOC4-206ENST00000571714 EPB41L4AQ9HCS5 686 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 NYAP2Q9P242 653 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 ZHX1Q9UKY1 873 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 LRRC37A2A6NM11 1700 aa13.35□□□□□ -0.27
NPLOC4-206ENST00000571714 SMARCA5O60264 1052 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 MS4A1P11836 297 aa13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 CST5P28325 142 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 C16orf59Q7L2K0 433 aa13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 KATNBL1Q9H079 304 aa13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 FAM184BQ9ULE4 1060 aa13.34□□□□□ -0.27
NPLOC4-206ENST00000571714 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 CTAGE5O15320 804 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 DUSP11O75319 330 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 TIMP1P01033 207 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 CDK7P50613 346 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 ACVR2BQ13705 512 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 RASIP1Q5U651 963 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 ZSCAN25Q6NSZ9 544 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 CPXCR1Q8N123 301 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 PRPF38AQ8NAV1 312 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 NUP133Q8WUM0 1156 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 OSBP2Q969R2 916 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 LRRCC1Q9C099 1032 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 UPF3AQ9H1J1 476 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 RAVER2Q9HCJ3 691 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
NPLOC4-206ENST00000571714 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 MINDY4BA8MYZ0 360 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 PRDM1O75626 825 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 ASGR1P07306 291 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 PBX2P40425 430 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 CCDC144BQ3MJ40 725 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 GIMAP6Q6P9H5 292 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 LRRC47Q8N1G4 583 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 KBTBD3Q8NAB2 608 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 MKL1Q969V6 931 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 KIFC2Q96AC6 838 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 CEP95Q96GE4 821 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 ECHDC1Q9NTX5 307 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 CLIP2Q9UDT6 1046 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 ELP1O95163 1332 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
NPLOC4-206ENST00000571714 GRXCR1A8MXD5 290 aa13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 M0R2C6 588 aa13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 C6orf222P0C671 652 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 CSF2RAP15509 400 aa13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 GJA9P57773 515 aa13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 TMEM240Q5SV17 173 aa13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 C20orf194Q5TEA3 1177 aa13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 TSHZ3Q63HK5 1081 aa13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 ARMCX2Q7L311 632 aa13.31□□□□□ -0.28
NPLOC4-206ENST00000571714 FAM126BQ8IXS8 530 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms