RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 CCDC122Q5T0U0 273 aa19.64■□□□□ 0.73
SCARF1-205ENST00000571272 FOXR1Q6PIV2 292 aa19.64■□□□□ 0.73
SCARF1-205ENST00000571272 CCDC148Q8NFR7 591 aa19.64■□□□□ 0.73
SCARF1-205ENST00000571272 GDAP1L1Q96MZ0 367 aa19.64■□□□□ 0.73
SCARF1-205ENST00000571272 RMND1Q9NWS8 449 aa19.64■□□□□ 0.73
SCARF1-205ENST00000571272 DDAH1O94760 285 aa19.63■□□□□ 0.73
SCARF1-205ENST00000571272 MB21D1Q8N884 522 aa19.63■□□□□ 0.73
SCARF1-205ENST00000571272 ZNF384Q8TF68 577 aa19.63■□□□□ 0.73
SCARF1-205ENST00000571272 MMS19Q96T76 1030 aa19.63■□□□□ 0.73
SCARF1-205ENST00000571272 NIP7Q9Y221 180 aaKnown RBP eCLIP19.63■□□□□ 0.73
SCARF1-205ENST00000571272 ITGB4P16144 1822 aa19.63■□□□□ 0.73
SCARF1-205ENST00000571272 H7C1D1 291 aa19.63■□□□□ 0.73
SCARF1-205ENST00000571272 GPKOWQ92917 476 aaPredicted RBP eCLIP19.63■□□□□ 0.73
SCARF1-205ENST00000571272 ZMYND10O75800 440 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 EIF5P55010 431 aaKnown RBP19.62■□□□□ 0.73
SCARF1-205ENST00000571272 TRAPPC11Q7Z392 1133 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 TNNT3P45378 269 aaPredicted RBP19.62■□□□□ 0.73
SCARF1-205ENST00000571272 HERVK_113P62684 666 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 TSR1Q2NL82 804 aaKnown RBP19.62■□□□□ 0.73
SCARF1-205ENST00000571272 WDR59Q6PJI9 974 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 BRIP1Q9BX63 1249 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 FAM205AQ6ZU69 1335 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 ADSSL1Q8N142 457 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 TRIM47Q96LD4 638 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 HAUS4Q9H6D7 363 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 GNL3LQ9NVN8 582 aaKnown RBP19.62■□□□□ 0.73
SCARF1-205ENST00000571272 SLAIN2Q9P270 581 aa19.62■□□□□ 0.73
SCARF1-205ENST00000571272 CYP2D6P10635 497 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 TRAPPC10P48553 1259 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 HSPA2P54652 639 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 PFKFB3Q16875 520 aaPredicted RBP19.61■□□□□ 0.73
SCARF1-205ENST00000571272 WDR93Q6P2C0 686 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 FAM71BQ8TC56 605 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 PYM1Q9BRP8 204 aaKnown RBP19.61■□□□□ 0.73
SCARF1-205ENST00000571272 SAR1BQ9Y6B6 198 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 DUOX1Q9NRD9 1551 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 LGALS16A8MUM7 142 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 KIAA1328Q86T90 577 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 TSPYL1Q9H0U9 437 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 FAM204AQ9H8W3 233 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 AGPAT5Q9NUQ2 364 aa19.61■□□□□ 0.73
SCARF1-205ENST00000571272 RRP15Q9Y3B9 282 aaKnown RBP19.61■□□□□ 0.73
SCARF1-205ENST00000571272 COL1A1P02452 1464 aaPredicted RBP19.6■□□□□ 0.73
SCARF1-205ENST00000571272 B4DLN1 442 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 PSMD14O00487 310 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 USP14P54578 494 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 NAALADL2Q58DX5 795 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 SRLQ86TD4 932 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 MSL3Q8N5Y2 521 aaKnown RBP19.6■□□□□ 0.73
SCARF1-205ENST00000571272 C4orf32Q8N8J7 132 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 HINFPQ9BQA5 517 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 DISC1Q9NRI5 854 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 PLCH1Q4KWH8 1693 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 LONP1P36776 959 aaKnown RBP19.6■□□□□ 0.73
SCARF1-205ENST00000571272 KLK7P49862 253 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 INTS5Q6P9B9 1019 aaKnown RBP19.6■□□□□ 0.73
SCARF1-205ENST00000571272 DNAJC7Q99615 494 aa19.6■□□□□ 0.73
SCARF1-205ENST00000571272 TUBBP07437 444 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 BLIDQ8IZY5 108 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 ZNF507Q8TCN5 953 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 LACRTQ9GZZ8 138 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 MTMR7Q9Y216 660 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 ZNF804BA4D1E1 1349 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 NTSR2O95665 410 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 FGRP09769 529 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 GSPT2Q8IYD1 628 aaKnown RBP19.59■□□□□ 0.73
SCARF1-205ENST00000571272 RIN2Q8WYP3 895 aaPredicted RBP19.59■□□□□ 0.73
SCARF1-205ENST00000571272 RASSF4Q9H2L5 321 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 CAPN11Q9UMQ6 739 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 DUSP10Q9Y6W6 482 aa19.59■□□□□ 0.73
SCARF1-205ENST00000571272 CICQ96RK0 1608 aaPredicted RBP19.59■□□□□ 0.73
SCARF1-205ENST00000571272 RCCD1A6NED2 376 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 TSPY2A6NKD2 308 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 ZNF185O15231 689 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 RNF40O75150 1001 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 SLC20A2Q08357 652 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 ARL6IP4Q66PJ3 421 aaKnown RBP19.58■□□□□ 0.73
SCARF1-205ENST00000571272 TMEM60Q9H2L4 133 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 ACBD3Q9H3P7 528 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 PLEKHA4Q9H4M7 779 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 MAGEC2Q9UBF1 373 aaPredicted RBP19.58■□□□□ 0.73
SCARF1-205ENST00000571272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.58■□□□□ 0.73
SCARF1-205ENST00000571272 MYH13Q9UKX3 1938 aa19.58■□□□□ 0.73
SCARF1-205ENST00000571272 TRIM21P19474 475 aaKnown RBP19.58■□□□□ 0.72
SCARF1-205ENST00000571272 CRKLP46109 303 aaKnown RBP19.58■□□□□ 0.72
SCARF1-205ENST00000571272 CAVIN4Q5BKX8 364 aa19.58■□□□□ 0.72
SCARF1-205ENST00000571272 DTHD1Q6ZMT9 781 aa19.58■□□□□ 0.72
SCARF1-205ENST00000571272 JAKMIP2Q96AA8 810 aa19.58■□□□□ 0.72
SCARF1-205ENST00000571272 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
SCARF1-205ENST00000571272 COL4A1P02462 1669 aa19.58■□□□□ 0.72
SCARF1-205ENST00000571272 CAMTA2O94983 1202 aa19.58■□□□□ 0.72
SCARF1-205ENST00000571272 CYP27A1Q02318 531 aa19.58■□□□□ 0.72
SCARF1-205ENST00000571272 EXOC5O00471 708 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 IVLP07476 585 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 ATP6V1AP38606 617 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 UBA7P41226 1012 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 SKIDA1Q1XH10 827 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 PARP10Q53GL7 1025 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 TYW1BQ6NUM6 668 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 C3orf67Q6ZVT6 689 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms