RNA–Protein interactions for RNA: ENST00000570742.1

TRPV1-205, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 3

Gene TRPV1, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-205ENST00000570742 ASCC2Q9H1I8 757 aaPredicted RBP18.67■□□□□ 0.58
TRPV1-205ENST00000570742 RIOX1Q9H6W3 641 aa18.67■□□□□ 0.58
TRPV1-205ENST00000570742 CCNA1P78396 465 aa18.66■□□□□ 0.58
TRPV1-205ENST00000570742 AKAP17AQ02040 695 aaKnown RBP18.66■□□□□ 0.58
TRPV1-205ENST00000570742 MKRN3Q13064 507 aaKnown RBP18.66■□□□□ 0.58
TRPV1-205ENST00000570742 BECN1Q14457 450 aa18.66■□□□□ 0.58
TRPV1-205ENST00000570742 ARHGEF6Q15052 776 aa18.66■□□□□ 0.58
TRPV1-205ENST00000570742 SYDE2Q5VT97 1194 aa18.66■□□□□ 0.58
TRPV1-205ENST00000570742 TRIM22Q8IYM9 498 aa18.66■□□□□ 0.58
TRPV1-205ENST00000570742 SMCR8Q8TEV9 937 aaPredicted RBP18.66■□□□□ 0.58
TRPV1-205ENST00000570742 PTPN18Q99952 460 aa18.66■□□□□ 0.58
TRPV1-205ENST00000570742 GPHNQ9NQX3 736 aaPredicted RBP18.66■□□□□ 0.58
TRPV1-205ENST00000570742 TPCN1Q9ULQ1 816 aa18.66■□□□□ 0.58
TRPV1-205ENST00000570742 ISY1Q9ULR0 285 aaKnown RBP18.66■□□□□ 0.58
TRPV1-205ENST00000570742 KIF3AQ9Y496 699 aa18.66■□□□□ 0.58
TRPV1-205ENST00000570742 hCG_1984214I3L0E3 225 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 PDIA4P13667 645 aaKnown RBP18.65■□□□□ 0.58
TRPV1-205ENST00000570742 IFNAR1P17181 557 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 HERVK_113P62684 666 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 GRM1Q13255 1194 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 TAF1CQ15572 869 aaPredicted RBP18.65■□□□□ 0.58
TRPV1-205ENST00000570742 TKFCQ3LXA3 575 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 TREML2Q5T2D2 321 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 TMTC3Q6ZXV5 915 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 KCTD1Q719H9 257 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 SAMD3Q8N6K7 520 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 DNAJC5GQ8N7S2 189 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 ZNF713Q8N859 430 aaPredicted RBP18.65■□□□□ 0.58
TRPV1-205ENST00000570742 WASF1Q92558 559 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 RRP36Q96EU6 259 aaKnown RBP18.65■□□□□ 0.58
TRPV1-205ENST00000570742 SENP2Q9HC62 589 aa18.65■□□□□ 0.58
TRPV1-205ENST00000570742 TLR2O60603 784 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 SLC25A27O95847 323 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 KIAA1755Q5JYT7 1200 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 HSCBQ8IWL3 235 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 FAM43AQ8N2R8 423 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 RGS22Q8NE09 1264 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 P2RX7Q99572 595 aaKnown RBP18.64■□□□□ 0.57
TRPV1-205ENST00000570742 RNF26Q9BY78 433 aaPredicted RBP18.64■□□□□ 0.57
TRPV1-205ENST00000570742 SLC38A10Q9HBR0 1119 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 GPCPD1Q9NPB8 672 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 SEC63Q9UGP8 760 aaKnown RBP18.64■□□□□ 0.57
TRPV1-205ENST00000570742 HPS5Q9UPZ3 1129 aa18.64■□□□□ 0.57
TRPV1-205ENST00000570742 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.64■□□□□ 0.57
TRPV1-205ENST00000570742 IGF2BP3O00425 579 aaKnown RBP eCLIP18.63■□□□□ 0.57
TRPV1-205ENST00000570742 VWA5AO00534 786 aa18.63■□□□□ 0.57
TRPV1-205ENST00000570742 AOC2O75106 756 aa18.63■□□□□ 0.57
TRPV1-205ENST00000570742 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
TRPV1-205ENST00000570742 GTF3C6Q969F1 213 aa18.63■□□□□ 0.57
TRPV1-205ENST00000570742 MTMR8Q96EF0 704 aa18.63■□□□□ 0.57
TRPV1-205ENST00000570742 GLT8D2Q9H1C3 349 aa18.63■□□□□ 0.57
TRPV1-205ENST00000570742 MORF4L1Q9UBU8 362 aa18.63■□□□□ 0.57
TRPV1-205ENST00000570742 PRR12Q9ULL5 1215 aa18.63■□□□□ 0.57
TRPV1-205ENST00000570742 MTMR7Q9Y216 660 aa18.63■□□□□ 0.57
TRPV1-205ENST00000570742 PNMA6FA0A0J9YX94 578 aa18.62■□□□□ 0.57
TRPV1-205ENST00000570742 ZBTB5O15062 677 aa18.62■□□□□ 0.57
TRPV1-205ENST00000570742 PRPF3O43395 683 aaKnown RBP18.62■□□□□ 0.57
TRPV1-205ENST00000570742 COL9A3Q14050 684 aaPredicted RBP18.62■□□□□ 0.57
TRPV1-205ENST00000570742 ME3Q16798 604 aa18.62■□□□□ 0.57
TRPV1-205ENST00000570742 ADGRF4Q8IZF3 695 aa18.62■□□□□ 0.57
TRPV1-205ENST00000570742 SHCBP1Q8NEM2 672 aa18.62■□□□□ 0.57
TRPV1-205ENST00000570742 GPRC5AQ8NFJ5 357 aa18.62■□□□□ 0.57
TRPV1-205ENST00000570742 CCDC12Q8WUD4 166 aaPredicted RBP18.62■□□□□ 0.57
TRPV1-205ENST00000570742 KIFC2Q96AC6 838 aa18.62■□□□□ 0.57
TRPV1-205ENST00000570742 INTS4Q96HW7 963 aaKnown RBP18.62■□□□□ 0.57
TRPV1-205ENST00000570742 NUP88Q99567 741 aaPredicted RBP18.62■□□□□ 0.57
TRPV1-205ENST00000570742 RANBP17Q9H2T7 1088 aaKnown RBP18.62■□□□□ 0.57
TRPV1-205ENST00000570742 FBXO40Q9UH90 709 aa18.62■□□□□ 0.57
TRPV1-205ENST00000570742 SPDYE16A6NNV3 312 aaPredicted RBP18.61■□□□□ 0.57
TRPV1-205ENST00000570742 XBP1P17861 261 aa18.61■□□□□ 0.57
TRPV1-205ENST00000570742 ADD1P35611 737 aaKnown RBP18.61■□□□□ 0.57
TRPV1-205ENST00000570742 SSRP1Q08945 709 aaKnown RBP18.61■□□□□ 0.57
TRPV1-205ENST00000570742 FAM110CQ1W6H9 321 aa18.61■□□□□ 0.57
TRPV1-205ENST00000570742 MYL10Q9BUA6 226 aa18.61■□□□□ 0.57
TRPV1-205ENST00000570742 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
TRPV1-205ENST00000570742 MAP3K20Q9NYL2 800 aaKnown RBP18.61■□□□□ 0.57
TRPV1-205ENST00000570742 THSD7BQ9C0I4 1608 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 FRMPD2Q68DX3 1309 aaPredicted RBP18.6■□□□□ 0.57
TRPV1-205ENST00000570742 STK36Q9NRP7 1315 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 K7ELQ4 463 aaPredicted RBP18.6■□□□□ 0.57
TRPV1-205ENST00000570742 ICAM1P05362 532 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 STAT3P40763 770 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 MCTP2Q6DN12 878 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 STAG2Q8N3U4 1231 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 SRBD1Q8N5C6 995 aaKnown RBP18.6■□□□□ 0.57
TRPV1-205ENST00000570742 JMYQ8N9B5 988 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 TMX3Q96JJ7 454 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 AMNQ9BXJ7 453 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 MROH8Q9H579 483 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 JMJD4Q9H9V9 463 aa18.6■□□□□ 0.57
TRPV1-205ENST00000570742 FAM217BQ9NTX9 383 aaPredicted RBP18.6■□□□□ 0.57
TRPV1-205ENST00000570742 STRNO43815 780 aa18.59■□□□□ 0.57
TRPV1-205ENST00000570742 DEXIO95424 95 aa18.59■□□□□ 0.57
TRPV1-205ENST00000570742 FMNL1O95466 1100 aaPredicted RBP18.59■□□□□ 0.57
TRPV1-205ENST00000570742 GNRH1P01148 92 aa18.59■□□□□ 0.57
TRPV1-205ENST00000570742 CDC27P30260 824 aa18.59■□□□□ 0.57
TRPV1-205ENST00000570742 CCT2P78371 535 aaKnown RBP18.59■□□□□ 0.57
TRPV1-205ENST00000570742 SCRN1Q12765 414 aa18.59■□□□□ 0.57
TRPV1-205ENST00000570742 KIF22Q14807 665 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms