RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 EPHB4P54760 987 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 IRX5P78411 483 aaPredicted RBP15.96■□□□□ 0.15
SPG7-207ENST00000563218 ZNF697Q5TEC3 545 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 TSHZ3Q63HK5 1081 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 TINF2Q9BSI4 451 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 LRRCC1Q9C099 1032 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 SLC5A4Q9NY91 659 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 PHF24Q9UPV7 400 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 ROBO3Q96MS0 1386 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 RASA1P20936 1047 aa15.95■□□□□ 0.14
SPG7-207ENST00000563218 STAT3P40763 770 aa15.95■□□□□ 0.14
SPG7-207ENST00000563218 CDX2Q99626 313 aaPredicted RBP15.95■□□□□ 0.14
SPG7-207ENST00000563218 TTYH1Q9H313 450 aaPredicted RBP15.95■□□□□ 0.14
SPG7-207ENST00000563218 EPB41L4AQ9HCS5 686 aaPredicted RBP15.95■□□□□ 0.14
SPG7-207ENST00000563218 RIPK3Q9Y572 518 aa15.95■□□□□ 0.14
SPG7-207ENST00000563218 A0A1W2PQ45 241 aaPredicted RBP15.94■□□□□ 0.14
SPG7-207ENST00000563218 A0A1W2PQY0 241 aa15.94■□□□□ 0.14
SPG7-207ENST00000563218 MYADML2A6NDP7 307 aa15.94■□□□□ 0.14
SPG7-207ENST00000563218 ADAMTS4O75173 837 aa15.94■□□□□ 0.14
SPG7-207ENST00000563218 RARBP10826 455 aa15.94■□□□□ 0.14
SPG7-207ENST00000563218 AMOTL1Q8IY63 956 aa15.94■□□□□ 0.14
SPG7-207ENST00000563218 STRBPQ96SI9 672 aaKnown RBP15.94■□□□□ 0.14
SPG7-207ENST00000563218 KANSL2Q9H9L4 492 aa15.94■□□□□ 0.14
SPG7-207ENST00000563218 GOPCQ9HD26 462 aa15.94■□□□□ 0.14
SPG7-207ENST00000563218 SYNRGQ9UMZ2 1314 aa15.94■□□□□ 0.14
SPG7-207ENST00000563218 GSG1L2A8MUP6 293 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 ADCY6O43306 1168 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 PQBP1O60828 265 aaKnown RBP15.93■□□□□ 0.14
SPG7-207ENST00000563218 NDUFB10O96000 172 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 KCTD2Q14681 263 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 C1orf53Q5VUE5 145 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 SNRNP48Q6IEG0 339 aaKnown RBP15.93■□□□□ 0.14
SPG7-207ENST00000563218 MYLIPQ8WY64 445 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 OSBP2Q969R2 916 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 SLF1Q9BQI6 1058 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 SEMA6BQ9H3T3 888 aa15.93■□□□□ 0.14
SPG7-207ENST00000563218 ARPP21Q9UBL0 812 aaPredicted RBP15.93■□□□□ 0.14
SPG7-207ENST00000563218 MYO9BQ13459 2157 aa15.92■□□□□ 0.14
SPG7-207ENST00000563218 MINDY4BA8MYZ0 360 aa15.92■□□□□ 0.14
SPG7-207ENST00000563218 SNAI1O95863 264 aaPredicted RBP15.92■□□□□ 0.14
SPG7-207ENST00000563218 CLTBP09497 229 aa15.92■□□□□ 0.14
SPG7-207ENST00000563218 SLC4A3P48751 1232 aa15.92■□□□□ 0.14
SPG7-207ENST00000563218 FGD4Q96M96 766 aa15.92■□□□□ 0.14
SPG7-207ENST00000563218 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
SPG7-207ENST00000563218 REV3LO60673 3130 aa15.91■□□□□ 0.14
SPG7-207ENST00000563218 M0R2C6 588 aa15.91■□□□□ 0.14
SPG7-207ENST00000563218 PRDM1O75626 825 aa15.91■□□□□ 0.14
SPG7-207ENST00000563218 AKR1A1P14550 325 aa15.91■□□□□ 0.14
SPG7-207ENST00000563218 SBK1Q52WX2 424 aa15.91■□□□□ 0.14
SPG7-207ENST00000563218 RNF180Q86T96 592 aa15.91■□□□□ 0.14
SPG7-207ENST00000563218 DDRGK1Q96HY6 314 aa15.91■□□□□ 0.14
SPG7-207ENST00000563218 DIS3Q9Y2L1 958 aaKnown RBP15.91■□□□□ 0.14
SPG7-207ENST00000563218 DNAJC25-GNG10A0A024R161 153 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 IGKV6D-41A0A0C4DH26 115 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 F5H6K3 240 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 KLRC3Q07444 240 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 FAAP100Q0VG06 881 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 CPXCR1Q8N123 301 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 LRRC47Q8N1G4 583 aaKnown RBP15.9■□□□□ 0.14
SPG7-207ENST00000563218 MAFAQ8NHW3 353 aaPredicted RBP15.9■□□□□ 0.14
SPG7-207ENST00000563218 TEX13BQ9BXU2 312 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 RAVER2Q9HCJ3 691 aaKnown RBP15.9■□□□□ 0.14
SPG7-207ENST00000563218 PRDM6Q9NQX0 595 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 ZHX1Q9UKY1 873 aaPredicted RBP15.9■□□□□ 0.14
SPG7-207ENST00000563218 SCN5AQ14524 2016 aa15.9■□□□□ 0.14
SPG7-207ENST00000563218 KIAA0355O15063 1070 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 GPAA1O43292 621 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 ACLYP53396 1101 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 SMAD3P84022 425 aaKnown RBP15.89■□□□□ 0.13
SPG7-207ENST00000563218 KBTBD3Q8NAB2 608 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 KLHDC9Q8NEP7 349 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 KIFC2Q96AC6 838 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 CHMP4CQ96CF2 233 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 CEP95Q96GE4 821 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 RNPC3Q96LT9 517 aaKnown RBP15.89■□□□□ 0.13
SPG7-207ENST00000563218 MKNK2Q9HBH9 465 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 ECHDC1Q9NTX5 307 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 NYAP2Q9P242 653 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 CLIP2Q9UDT6 1046 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 TACC3Q9Y6A5 838 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 CHD9Q3L8U1 2897 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 SYNGAP1Q96PV0 1343 aa15.89■□□□□ 0.13
SPG7-207ENST00000563218 MUC3AQ02505 3323 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 RAG1P15918 1043 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 PTGS1P23219 599 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 KCNA10Q16322 511 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 CCSAPQ6IQ19 270 aaPredicted RBP15.88■□□□□ 0.13
SPG7-207ENST00000563218 RASGRP2Q7LDG7 609 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 PLEKHM2Q8IWE5 1019 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 APPBP2Q92624 585 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 SEC62Q99442 399 aaKnown RBP15.88■□□□□ 0.13
SPG7-207ENST00000563218 STARD7Q9NQZ5 370 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 TMEM39AQ9NV64 488 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 CNPY2Q9Y2B0 182 aa15.88■□□□□ 0.13
SPG7-207ENST00000563218 DDX49Q9Y6V7 483 aaKnown RBP15.88■□□□□ 0.13
SPG7-207ENST00000563218 RNF113AO15541 343 aaKnown RBP15.87■□□□□ 0.13
SPG7-207ENST00000563218 COPB2P35606 906 aa15.87■□□□□ 0.13
SPG7-207ENST00000563218 MAMDC4Q6UXC1 1216 aa15.87■□□□□ 0.13
SPG7-207ENST00000563218 DDX11Q96FC9 970 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms