RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 FUT4P22083 530 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ACADSBP45954 432 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 IRAK1P51617 712 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 GPC3P51654 580 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ZNF131P52739 623 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 EVCP57679 992 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 FAM160A1Q05DH4 1040 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 BIRC3Q13489 604 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 PKD2Q13563 968 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ITGA7Q13683 1181 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 PKP1Q13835 747 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 LRP8Q14114 963 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ACCSLQ4AC99 568 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 FAM117BQ6P1L5 589 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 LVRNQ6Q4G3 990 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 TBC1D9Q6ZT07 1266 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ZNF554Q86TJ5 538 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 RELL1Q8IUW5 271 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 TMEM151BQ8IW70 566 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 CCAR1Q8IX12 1150 aaKnown RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 CHCHD4Q8N4Q1 142 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 CRACR2BQ8N4Y2 399 aaPredicted RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 DIS3LQ8TF46 1054 aaKnown RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 MAML1Q92585 1016 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ATP6V0A1Q93050 837 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 FBXW7Q969H0 707 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ERP27Q96DN0 273 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ABHD8Q96I13 439 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 PDGFDQ9GZP0 370 aaPredicted RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 FAM204AQ9H8W3 233 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 GPR108Q9NPR9 543 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 TYW1Q9NV66 732 aaKnown RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 TBCCD1Q9NVR7 557 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 FKBP14Q9NWM8 211 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 CHPF2Q9P2E5 772 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 GTF3C4Q9UKN8 822 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 TTC7AQ9ULT0 858 aaPredicted RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 R3HDM2Q9Y2K5 976 aaKnown RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 C2CD2Q9Y426 696 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 KIF24Q5T7B8 1368 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 DENND4BO75064 1496 aaPredicted RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 KDM5CP41229 1560 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 A0A0B4J203 849 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 GOLGA6L7A0A1B0GV03 622 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 LOC105371267A0A1B0GV96 52 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 TRIM43BA6NCK2 446 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 STXBP3O00186 592 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 PRC1O43663 620 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 DIAPH1O60610 1272 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 TSPAN1O60635 241 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 B3GALNT1O75752 331 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 CD9P21926 228 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 S100A1P23297 94 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 PSMA3P25788 255 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 TXLNAP40222 546 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 TSPAN7P41732 249 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 PIK3CAP42336 1068 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 NLRP5P59047 1200 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 ETF1P62495 437 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 TUBA4AP68366 448 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 BASP1P80723 227 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 MRPS35P82673 323 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 SKOR1P84550 965 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 FOXK1P85037 733 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 PPFIA1Q13136 1202 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 MSLNQ13421 630 aaPredicted RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 SNW1Q13573 536 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 DPYSQ14117 519 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 SPIDRQ14159 915 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 DHX8Q14562 1220 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 KCTD2Q14681 263 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 LONRF1Q17RB8 773 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 LACTB2Q53H82 288 aaPredicted RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 FAM209AQ5JX71 171 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 FIP1L1Q6UN15 594 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 CCDC121Q6ZUS5 278 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 DAAM2Q86T65 1068 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 CABP7Q86V35 215 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 LUZP1Q86V48 1076 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 OSTM1Q86WC4 334 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 WDR75Q8IWA0 830 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 BRSK2Q8IWQ3 736 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 RNF10Q8N5U6 811 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 ARL6IP6Q8N6S5 226 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 SPERTQ8NA61 448 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 APPL2Q8NEU8 664 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 ANKRD49Q8WVL7 239 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 ZFPM2Q8WW38 1151 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 IFT81Q8WYA0 676 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 KCTD12Q96CX2 325 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 ASIC4Q96FT7 647 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 EPSTI1Q96J88 318 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 NDNQ99608 321 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 HNRNPABQ99729 332 aaKnown RBP5.49□□□□□ -1.53
TCF4-215ENST00000562638 HAUS7Q99871 368 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 SH3GL2Q99962 352 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 CARD14Q9BXL6 1004 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 GBP3Q9H0R5 595 aa5.49□□□□□ -1.53
TCF4-215ENST00000562638 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.49□□□□□ -1.53
TCF4-215ENST00000562638 SUCLA2Q9P2R7 463 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms