RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 SLC27A2O14975 620 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 XRCC5P13010 732 aaKnown RBP6.6□□□□□ -1.35
LINC01963-201ENST00000562038 ICA1Q05084 483 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 CREB3L3Q68CJ9 461 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 IQCA1Q86XH1 822 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 BRI3BPQ8WY22 251 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 RILPL2Q969X0 211 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 RANBP17Q9H2T7 1088 aaKnown RBP6.6□□□□□ -1.35
LINC01963-201ENST00000562038 MROH8Q9H579 483 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 HOXC10Q9NYD6 342 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 FBXO40Q9UH90 709 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 RBM8AQ9Y5S9 174 aaKnown RBP6.6□□□□□ -1.35
LINC01963-201ENST00000562038 PRKAB2O43741 272 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 TLR2O60603 784 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 TRPA1O75762 1119 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 ZKSCAN1P17029 563 aaPredicted RBP6.6□□□□□ -1.35
LINC01963-201ENST00000562038 ITGB8P26012 769 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 MAPK4P31152 587 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 DSG3P32926 999 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 MCM5P33992 734 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 MCM2P49736 904 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 SMAD3P84022 425 aaKnown RBP6.6□□□□□ -1.35
LINC01963-201ENST00000562038 RRP1BQ14684 758 aaKnown RBP6.6□□□□□ -1.35
LINC01963-201ENST00000562038 B4GALNT3Q6L9W6 998 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 TBC1D10CQ8IV04 446 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 SDR42E1Q8WUS8 393 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 ZSCAN10Q96SZ4 725 aaPredicted RBP6.6□□□□□ -1.35
LINC01963-201ENST00000562038 MYH15Q9Y2K3 1946 aa6.6□□□□□ -1.35
LINC01963-201ENST00000562038 SH2B2O14492 632 aaPredicted RBP6.59□□□□□ -1.35
LINC01963-201ENST00000562038 OLFML2BQ68BL8 750 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 RIOX2Q8IUF8 465 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 CHST13Q8NET6 341 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 PXYLP1Q8TE99 480 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 CHURC1Q8WUH1 139 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 USP6NLQ92738 828 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 EMILIN3Q9NT22 766 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 MORC2Q9Y6X9 1032 aaPredicted RBP6.59□□□□□ -1.35
LINC01963-201ENST00000562038 E7EWF7 191 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 STRNO43815 780 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 CYP21A2P08686 494 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 AKR1B1P15121 316 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 INPP5BP32019 993 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 CCNA1P78396 465 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 TRDNQ13061 729 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 PICALMQ13492 652 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 VPS53Q5VIR6 699 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 CWC27Q6UX04 472 aaKnown RBP6.59□□□□□ -1.35
LINC01963-201ENST00000562038 DHX32Q7L7V1 743 aaKnown RBP6.59□□□□□ -1.35
LINC01963-201ENST00000562038 ZNF274Q96GC6 653 aaPredicted RBP6.59□□□□□ -1.35
LINC01963-201ENST00000562038 PPP1R9AQ9ULJ8 1098 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 JAG2Q9Y219 1238 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 LOXHD1Q8IVV2 1947 aa6.59□□□□□ -1.35
LINC01963-201ENST00000562038 KIAA1217Q5T5P2 1943 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 CCL15-CCL14A0A0B4J2E2 113 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 ESYT2A0FGR8 921 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 GJB1P08034 283 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 TSPY3P0CV98 308 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 TSPY8P0CW00 308 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 CCL15Q16663 113 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 C8orf34Q49A92 452 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 XRRA1Q6P2D8 792 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 IGDCC4Q8TDY8 1250 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 LRCH3Q96II8 777 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 MKNK2Q9HBH9 465 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 SH3GLB2Q9NR46 395 aa6.59□□□□□ -1.36
LINC01963-201ENST00000562038 ABCB11O95342 1321 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 NEDD4P46934 1319 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 PALM3A6NDB9 673 aaPredicted RBP6.58□□□□□ -1.36
LINC01963-201ENST00000562038 SLC15A5A6NIM6 579 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 UBE2Q2LH0YL09 131 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 GH2P01242 217 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 ZSCAN29Q8IWY8 852 aaPredicted RBP6.58□□□□□ -1.36
LINC01963-201ENST00000562038 SEC62Q99442 399 aaKnown RBP6.58□□□□□ -1.36
LINC01963-201ENST00000562038 TRAIPQ9BWF2 469 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 RIOX1Q9H6W3 641 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 ELP3Q9H9T3 547 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 IL17RBQ9NRM6 502 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 PFASO15067 1338 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 ZNFX1Q9P2E3 1918 aaKnown RBP6.58□□□□□ -1.36
LINC01963-201ENST00000562038 BTBD19C9JJ37 291 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 VCAM1P19320 739 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 HOXD10P28358 340 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 KIF5BP33176 963 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 FAM193AP78312 1265 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 ZNF543Q08ER8 600 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 COG2Q14746 738 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 TSHZ3Q63HK5 1081 aa6.58□□□□□ -1.36
LINC01963-201ENST00000562038 CCDC196A0A1B0GTZ2 297 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 CNMDO75829 334 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 STAM2O75886 525 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 ECM2O94769 699 aaPredicted RBP6.57□□□□□ -1.36
LINC01963-201ENST00000562038 RPS6KB1P23443 525 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 CACNB3P54284 484 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 PTH1RQ03431 593 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 TCP10Q12799 353 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 ORC2Q13416 577 aaPredicted RBP6.57□□□□□ -1.36
LINC01963-201ENST00000562038 GALNT17Q6IS24 598 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 SLF1Q9BQI6 1058 aa6.57□□□□□ -1.36
LINC01963-201ENST00000562038 LLPHQ9BRT6 129 aaKnown RBP6.57□□□□□ -1.36
LINC01963-201ENST00000562038 LY9Q9HBG7 655 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms