RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 ATP2A1O14983 1001 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 MYCP01106 439 aaPredicted RBP8.2□□□□□ -1.1
SPG11-224ENST00000561268 CACNB2Q08289 660 aaPredicted RBP8.2□□□□□ -1.1
SPG11-224ENST00000561268 ALX1Q15699 326 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 RIOX2Q8IUF8 465 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 IFNL3Q8IZI9 196 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 GMCL1P1Q8NEA9 526 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 NPLOC4Q8TAT6 608 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 MKL1Q969V6 931 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 EVI5LQ96CN4 794 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 FSD1Q9BTV5 496 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 HTATIP2Q9BUP3 242 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 TANGO6Q9C0B7 1094 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 HOXC10Q9NYD6 342 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 PPP1R9AQ9ULJ8 1098 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 SCN10AQ9Y5Y9 1956 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 POTEB3A0JP26 581 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 STRNO43815 780 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 EIF5BO60841 1220 aaKnown RBP8.19□□□□□ -1.1
SPG11-224ENST00000561268 FLOT1O75955 427 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 NDUFB10O96000 172 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 ERCC3P19447 782 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 CYP2B6P20813 491 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 COPB2P35606 906 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 DEKP35659 375 aaKnown RBP8.19□□□□□ -1.1
SPG11-224ENST00000561268 TMEM132BQ14DG7 1078 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 HABP4Q5JVS0 413 aaKnown RBP8.19□□□□□ -1.1
SPG11-224ENST00000561268 POTEBQ6S5H4 581 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 NEDD1Q8NHV4 660 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 DIS3LQ8TF46 1054 aaKnown RBP8.19□□□□□ -1.1
SPG11-224ENST00000561268 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 MROH8Q9H579 483 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 GOPCQ9HD26 462 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 FBXO28Q9NVF7 368 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 MTMR4Q9NYA4 1195 aa8.19□□□□□ -1.1
SPG11-224ENST00000561268 BIN2Q9UBW5 565 aaPredicted RBP8.19□□□□□ -1.1
SPG11-224ENST00000561268 DNAJC25-GNG10A0A024R161 153 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 A0A0D9SFI3 127 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 A0A1W2PPC1 479 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 H0YGN5 161 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 VWA5AO00534 786 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 ORC4O43929 436 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 MSCO60682 206 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 SLC25A27O95847 323 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 ADORA2AP29274 412 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 CCND3P30281 292 aaPredicted RBP8.18□□□□□ -1.1
SPG11-224ENST00000561268 TDO2P48775 406 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 FXR1P51114 621 aaKnown RBP eCLIP8.18□□□□□ -1.1
SPG11-224ENST00000561268 NUCB1Q02818 461 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 PPARAQ07869 468 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 C8orf34Q49A92 452 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 SPICE1Q8N0Z3 855 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 TRPV1Q8NER1 839 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 NAPBQ9H115 298 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 ZNF287Q9HBT7 754 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 HELLSQ9NRZ9 838 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 NRBP1Q9UHY1 535 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 IVNS1ABPQ9Y6Y0 642 aa8.18□□□□□ -1.1
SPG11-224ENST00000561268 MYH7BA7E2Y1 1941 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 PLA2G6O60733 806 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 COBLO75128 1261 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 TTLL1O95922 423 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 OAZ1P54368 228 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 SNX17Q15036 470 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 FAM83BQ5T0W9 1011 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 ANKRD45Q5TZF3 282 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 VPS53Q5VIR6 699 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 CCDC129Q6ZRS4 1044 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 NECAB2Q7Z6G3 386 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 ZNF589Q86UQ0 364 aaPredicted RBP8.17□□□□□ -1.1
SPG11-224ENST00000561268 PLEKHM2Q8IWE5 1019 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 GMCL1Q96IK5 515 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 PAWRQ96IZ0 340 aaKnown RBP8.17□□□□□ -1.1
SPG11-224ENST00000561268 MAML3Q96JK9 1138 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 SLF1Q9BQI6 1058 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 NACAP1Q9BZK3 213 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 LNPKQ9C0E8 428 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 NBPF3Q9H094 633 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 DDX20Q9UHI6 824 aaKnown RBP8.17□□□□□ -1.1
SPG11-224ENST00000561268 DIS3Q9Y2L1 958 aaKnown RBP8.17□□□□□ -1.1
SPG11-224ENST00000561268 CCDC171Q6TFL3 1326 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 DNAH12Q6ZR08 3092 aa8.17□□□□□ -1.1
SPG11-224ENST00000561268 SZT2Q5T011 3432 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 MINDY4BA8MYZ0 360 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 F5H6K3 240 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 SEPT4O43236 478 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 PRDM1O75626 825 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 IGHDP01880 384 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 PCP11498 1178 aaKnown RBP8.16□□□□□ -1.1
SPG11-224ENST00000561268 NT5C2P49902 561 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 PDE4BQ07343 736 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 KLRC3Q07444 240 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 ZNF792Q3KQV3 632 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 MFSD14CQ5VZR4 134 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 CHD1LQ86WJ1 897 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 MSL3Q8N5Y2 521 aaKnown RBP8.16□□□□□ -1.1
SPG11-224ENST00000561268 FAM227BQ96M60 508 aa8.16□□□□□ -1.1
SPG11-224ENST00000561268 FGD4Q96M96 766 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms