RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ZNF354CQ86Y25 554 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 ARMC10Q8N2F6 343 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 LILRB2Q8N423 598 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 ENAHQ8N8S7 591 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 JMYQ8N9B5 988 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 GALNT11Q8NCW6 608 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 APPL2Q8NEU8 664 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 C17orf50Q8WW18 174 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 APPBP2Q92624 585 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 JARID2Q92833 1246 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 TBC1D31Q96DN5 1066 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 MYRFLQ96LU7 910 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 IQCGQ9H095 443 aaKnown RBP5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 PPCSQ9HAB8 311 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 NGRNQ9NPE2 291 aaKnown RBP5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 SH3GLB2Q9NR46 395 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 DONSONQ9NYP3 566 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 STIM2Q9P246 746 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 IP6K2Q9UHH9 426 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 KCNMB2Q9Y691 235 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 PIK3R4Q99570 1358 aa5.24□□□□□ -1.57
HMGB3P26-201ENST00000560051 SHTN1A0MZ66 631 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ERICH4A6NGS2 130 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 VGLL3A8MV65 326 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 TMCO5BA8MYB1 307 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 C9IYK1 514 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ALDH1L1O75891 902 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 BAIAP3O94812 1187 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 IGHA2P01877 340 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 IFIT2P09913 472 aaKnown RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 U2AF1L5P0DN76 240 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 SLC5A1P13866 664 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ATF3P18847 181 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 SPINK2P20155 84 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 CCNCP24863 283 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 PMLP29590 882 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 OAS2P29728 719 aaKnown RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 TPD52P55327 224 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 U2AF1Q01081 240 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 PTPN12Q05209 780 aaKnown RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 PAK2Q13177 524 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 SLMAPQ14BN4 828 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 WTAPQ15007 396 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 MUM1Q2TAK8 710 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 TXNDC11Q6PKC3 985 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 MMS22LQ6ZRQ5 1243 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 LRP10Q7Z4F1 713 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 TAX1BP1Q86VP1 789 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 TTC30AQ86WT1 665 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 SKAP1Q86WV1 359 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 DTX1Q86Y01 620 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 MYOCDQ8IZQ8 938 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 NGEFQ8N5V2 710 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 NUDT16Q96DE0 195 aaKnown RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 FAM46AQ96IP4 442 aaKnown RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ZNF396Q96N95 335 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 GSDMAQ96QA5 445 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 DEPDC7Q96QD5 511 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 NCAPGQ9BPX3 1015 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 FAM83CQ9BQN1 747 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 HERPUD2Q9BSE4 406 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 CCDC113Q9H0I3 377 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ZNF408Q9H9D4 720 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 CYP4F11Q9HBI6 524 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 MED4Q9NPJ6 270 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ATG3Q9NT62 314 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ZNHIT6Q9NWK9 470 aaKnown RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 FAM184BQ9ULE4 1060 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 LRFN2Q9ULH4 789 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ANGEL1Q9UNK9 670 aaKnown RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 RABL2BQ9UNT1 228 aa5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 EIF4G1Q04637 1599 aaKnown RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 ARID1BQ8NFD5 2236 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P26-201ENST00000560051 SETD1BQ9UPS6 1966 aaKnown RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 CCDC196A0A1B0GTZ2 297 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 FOXN3O00409 490 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 FSCN2O14926 492 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 GAS2O43903 313 aaKnown RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 SKAP2O75563 359 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 BMP3P12645 472 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 NPR3P17342 541 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 PTPRAP18433 802 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 VCAM1P19320 739 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 POU3F3P20264 500 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 SNX16P57768 344 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 KRT83P78385 493 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 DDX10Q13206 875 aaKnown RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 TTF1Q15361 905 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 PTPN14Q15678 1187 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 ANKRD34AQ69YU3 496 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 FDX2Q6P4F2 183 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 CFAP161Q6P656 301 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 BEND4Q6ZU67 534 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 WAPLQ7Z5K2 1190 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 FAM20CQ8IXL6 584 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 ANKRD42Q8N9B4 389 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 OR13H1Q8NG92 308 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 TDRD7Q8NHU6 1098 aaKnown RBP5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 SHKBP1Q8TBC3 707 aa5.22□□□□□ -1.57
HMGB3P26-201ENST00000560051 TMEM87BQ96K49 555 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms