RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 A0A087X0B3 334 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 G3V3G9 751 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 CBFA2T2O43439 604 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 DHX8Q14562 1220 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 DCAF8Q5TAQ9 597 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 CCDC150Q8NCX0 1101 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 GPKOWQ92917 476 aaPredicted RBP eCLIP16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 VWA3AA6NCI4 1184 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 SLFN14P0C7P3 912 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 NEDD1Q8NHV4 660 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 ZNF541Q9H0D2 1346 aa16.47■□□□□ 0.23
RABGGTA-212ENST00000559974 PALM3A6NDB9 673 aaPredicted RBP16.46■□□□□ 0.23
RABGGTA-212ENST00000559974 ADAMTS3O15072 1205 aa16.46■□□□□ 0.23
RABGGTA-212ENST00000559974 SERPINC1P01008 464 aa16.46■□□□□ 0.23
RABGGTA-212ENST00000559974 SH3RF1Q7Z6J0 888 aa16.46■□□□□ 0.23
RABGGTA-212ENST00000559974 NIM1KQ8IY84 436 aa16.46■□□□□ 0.23
RABGGTA-212ENST00000559974 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
RABGGTA-212ENST00000559974 FANCLQ9NW38 375 aa16.46■□□□□ 0.23
RABGGTA-212ENST00000559974 CYTH3O43739 400 aa16.46■□□□□ 0.22
RABGGTA-212ENST00000559974 UBASH3AP57075 661 aa16.46■□□□□ 0.22
RABGGTA-212ENST00000559974 SLC35G1Q2M3R5 365 aa16.46■□□□□ 0.22
RABGGTA-212ENST00000559974 C16orf45Q96MC5 204 aaPredicted RBP16.46■□□□□ 0.22
RABGGTA-212ENST00000559974 RNF181Q9P0P0 153 aa16.46■□□□□ 0.22
RABGGTA-212ENST00000559974 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.22
RABGGTA-212ENST00000559974 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 F8W031 263 aaPredicted RBP16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 PSMD14O00487 310 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 LMNB1P20700 586 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 MCM7P33993 719 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 GTF2F1P35269 517 aaKnown RBP eCLIP16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 CXCL9Q07325 125 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 TPD52L1Q16890 204 aaPredicted RBP16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 DACT2Q5SW24 774 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 WWC2Q6AWC2 1192 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 GALNT17Q6IS24 598 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 TYW1BQ6NUM6 668 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 PODNQ7Z5L7 613 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 FAM177A1Q8N128 213 aaPredicted RBP16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 DAGLBQ8NCG7 672 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 PAGE5Q96GU1 130 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 ZNRF3Q9ULT6 936 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 SUGT1Q9Y2Z0 365 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 DAGLAQ9Y4D2 1042 aa16.45■□□□□ 0.22
RABGGTA-212ENST00000559974 M0R2N6 131 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 ARL6IP4Q66PJ3 421 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 ARMCX5Q6P1M9 558 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 ENOX1Q8TC92 643 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 DPF2Q92785 391 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 BARHL2Q9NY43 387 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 MTMR7Q9Y216 660 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 PCDHAC2Q9Y5I4 1007 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 SFPQP23246 707 aaKnown RBP eCLIP16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 AFMP43652 599 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 FMR1Q06787 632 aaKnown RBP eCLIP16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 CFAP100Q494V2 611 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 HEATR3Q7Z4Q2 680 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 PYM1Q9BRP8 204 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 SPZ1Q9BXG8 430 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 KCND1Q9NSA2 647 aa16.44■□□□□ 0.22
RABGGTA-212ENST00000559974 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
RABGGTA-212ENST00000559974 STXBP3O00186 592 aa16.43■□□□□ 0.22
RABGGTA-212ENST00000559974 TNNT1P13805 278 aa16.43■□□□□ 0.22
RABGGTA-212ENST00000559974 ERCC5P28715 1186 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-212ENST00000559974 CT47A1Q5JQC4 288 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-212ENST00000559974 NFE2L3Q9Y4A8 694 aa16.43■□□□□ 0.22
RABGGTA-212ENST00000559974 CCDC194A0A1B0GVG4 234 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 FZD9O00144 591 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 GOLGA8HP0CJ92 632 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 TOP1P11387 765 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 ZNF18P17022 549 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 NOVP48745 357 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 DPYDQ12882 1025 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 E2F4Q16254 413 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 IL17AQ16552 155 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 C4orf32Q8N8J7 132 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 IQUBQ8NA54 791 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 RASGRP4Q8TDF6 673 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 CEP95Q96GE4 821 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 GSDMAQ96QA5 445 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 PCDHA6Q9UN73 950 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 PCDHA8Q9Y5H6 950 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 PLIN4Q96Q06 1357 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 LONP1P36776 959 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 KIAA0825Q8IV33 1275 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 VSTM4Q8IW00 320 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 VPS33BQ9H267 617 aa16.42■□□□□ 0.22
RABGGTA-212ENST00000559974 USP27XA6NNY8 438 aa16.41■□□□□ 0.22
RABGGTA-212ENST00000559974 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-212ENST00000559974 NRDCO43847 1150 aa16.41■□□□□ 0.22
RABGGTA-212ENST00000559974 SMARCA1P28370 1054 aa16.41■□□□□ 0.22
RABGGTA-212ENST00000559974 SCNN1DP51172 638 aa16.41■□□□□ 0.22
RABGGTA-212ENST00000559974 RASGRP2Q7LDG7 609 aa16.41■□□□□ 0.22
RABGGTA-212ENST00000559974 TRMT44Q8IYL2 757 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-212ENST00000559974 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms