RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MANSC4A6NHS7 340 aaPredicted RBP19.17■□□□□ 0.66
TPM1-219ENST00000559397 ADD1P35611 737 aaKnown RBP19.17■□□□□ 0.66
TPM1-219ENST00000559397 CCDC96Q2M329 555 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 GPATCH4Q5T3I0 446 aaKnown RBP19.17■□□□□ 0.66
TPM1-219ENST00000559397 TTBK2Q6IQ55 1244 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 ZIC5Q96T25 663 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 AGTPBP1Q9UPW5 1226 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 KIF3AQ9Y496 699 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 KIF5BP33176 963 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 PPP2R5BQ15173 497 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 CATSPERGQ6ZRH7 1159 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 DDX11Q96FC9 970 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 PTPN18Q99952 460 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 GPCPD1Q9NPB8 672 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 RBM28Q9NW13 759 aaKnown RBP19.17■□□□□ 0.66
TPM1-219ENST00000559397 PARP14Q460N5 1801 aa19.17■□□□□ 0.66
TPM1-219ENST00000559397 RLFQ13129 1914 aa19.16■□□□□ 0.66
TPM1-219ENST00000559397 PLA2G6O60733 806 aa19.16■□□□□ 0.66
TPM1-219ENST00000559397 FDPSP14324 419 aaKnown RBP19.16■□□□□ 0.66
TPM1-219ENST00000559397 HOXA7P31268 230 aaPredicted RBP19.16■□□□□ 0.66
TPM1-219ENST00000559397 MCTP1Q6DN14 999 aa19.16■□□□□ 0.66
TPM1-219ENST00000559397 BTNL9Q6UXG8 535 aa19.16■□□□□ 0.66
TPM1-219ENST00000559397 TMTC3Q6ZXV5 915 aa19.16■□□□□ 0.66
TPM1-219ENST00000559397 FAM184AQ8NB25 1140 aa19.16■□□□□ 0.66
TPM1-219ENST00000559397 VPS37CA5D8V6 355 aaPredicted RBP19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L15C9J2P7 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 BTBD19C9JJ37 291 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L13C9JLJ4 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 TMEM232C9JQI7 657 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L11C9JVI0 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 KLRF2D3W0D1 207 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L18D6R9N7 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L22D6RA61 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L17D6RBQ6 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L19D6RCP7 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L20D6RJB6 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 PLEKHA8P1O95397 391 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 USP17L24Q0WX57 530 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 NOGQ13253 232 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 GRM1Q13255 1194 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 NTRK3Q16288 839 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 SLC35G1Q2M3R5 365 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 NBPF11Q86T75 865 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 SRBD1Q8N5C6 995 aaKnown RBP19.15■□□□□ 0.66
TPM1-219ENST00000559397 CHAMP1Q96JM3 812 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 CPVLQ9H3G5 476 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 LMBRD1Q9NUN5 540 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 FBXO28Q9NVF7 368 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 FEM1BQ9UK73 627 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 ATP6V1DQ9Y5K8 247 aa19.15■□□□□ 0.66
TPM1-219ENST00000559397 CCDC196A0A1B0GTZ2 297 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 TRAK2O60296 914 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 GNAQP50148 359 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 STAT2P52630 851 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 INHBEP58166 350 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 KIF23Q02241 960 aaPredicted RBP19.14■□□□□ 0.66
TPM1-219ENST00000559397 FUT2Q10981 343 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 ANKRD23Q86SG2 305 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 TANGO6Q9C0B7 1094 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 UBA5Q9GZZ9 404 aa19.14■□□□□ 0.66
TPM1-219ENST00000559397 CPLX1O14810 134 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 CYTH3O43739 400 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 AOC2O75106 756 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 SMARCA1P28370 1054 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 SLC16A2P36021 539 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 TM4SF4P48230 202 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 VEGFBP49765 207 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 CMTR1Q8N1G2 835 aaKnown RBP19.14■□□□□ 0.65
TPM1-219ENST00000559397 FAM43AQ8N2R8 423 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 RGS22Q8NE09 1264 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 LZTS2Q9BRK4 669 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 ISY1Q9ULR0 285 aaKnown RBP19.14■□□□□ 0.65
TPM1-219ENST00000559397 SLC45A1Q9Y2W3 748 aa19.14■□□□□ 0.65
TPM1-219ENST00000559397 IGF2BP3O00425 579 aaKnown RBP eCLIP19.13■□□□□ 0.65
TPM1-219ENST00000559397 CDKL5O76039 1030 aa19.13■□□□□ 0.65
TPM1-219ENST00000559397 SKOR2Q2VWA4 1001 aaPredicted RBP19.13■□□□□ 0.65
TPM1-219ENST00000559397 CPLX2Q6PUV4 134 aaKnown RBP19.13■□□□□ 0.65
TPM1-219ENST00000559397 FAM160B2Q86V87 743 aa19.13■□□□□ 0.65
TPM1-219ENST00000559397 CHURC1Q8WUH1 139 aa19.13■□□□□ 0.65
TPM1-219ENST00000559397 RIOX1Q9H6W3 641 aa19.13■□□□□ 0.65
TPM1-219ENST00000559397 FLOT1O75955 427 aa19.12■□□□□ 0.65
TPM1-219ENST00000559397 SREBF2Q12772 1141 aa19.12■□□□□ 0.65
TPM1-219ENST00000559397 PABPC4Q13310 644 aaKnown RBP eCLIP19.12■□□□□ 0.651e-6■□□□□ 11.2
TPM1-219ENST00000559397 COG2Q14746 738 aa19.12■□□□□ 0.65
TPM1-219ENST00000559397 SYDE2Q5VT97 1194 aa19.12■□□□□ 0.65
TPM1-219ENST00000559397 SLF1Q9BQI6 1058 aa19.12■□□□□ 0.65
TPM1-219ENST00000559397 SPZ1Q9BXG8 430 aa19.12■□□□□ 0.65
TPM1-219ENST00000559397 ASCC2Q9H1I8 757 aaPredicted RBP19.12■□□□□ 0.65
TPM1-219ENST00000559397 ORC3Q9UBD5 711 aaPredicted RBP19.12■□□□□ 0.65
TPM1-219ENST00000559397 PPP1R9AQ9ULJ8 1098 aa19.12■□□□□ 0.65
TPM1-219ENST00000559397 PRR12Q9ULL5 1215 aa19.12■□□□□ 0.65
TPM1-219ENST00000559397 BAZ2BQ9UIF8 2168 aaKnown RBP19.12■□□□□ 0.65
TPM1-219ENST00000559397 PDHXO00330 501 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 IFNAR1P17181 557 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 DSG3P32926 999 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 IFNL1Q8IU54 200 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 ADGRF4Q8IZF3 695 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 PRPF38AQ8NAV1 312 aaKnown RBP19.11■□□□□ 0.65
TPM1-219ENST00000559397 TMEM87AQ8NBN3 555 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 ZCCHC17Q9NP64 241 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms