RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 MB21D2Q8IYB1 491 aaPredicted RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 ABHD10Q9NUJ1 306 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 RASAL2Q9UJF2 1139 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 ADGRG1Q9Y653 693 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 H2AFXP16104 143 aaPredicted RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 ADD2P35612 726 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 CTSWP56202 376 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 RASSF7Q02833 373 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 ENGASEQ8NFI3 743 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 PPP1R12CQ9BZL4 782 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 NHEJ1Q9H9Q4 299 aaPredicted RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 KCNK9Q9NPC2 374 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 PIH1D3Q9NQM4 214 aaKnown RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 ZSWIM5Q9P217 1185 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 SRPRBQ9Y5M8 271 aaKnown RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 IL2RBP14784 551 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 CTNNA1P35221 906 aaKnown RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 BCAMP50895 628 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 PDE1CQ14123 709 aaPredicted RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 TCP11X2Q5H9J9 407 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 RASGRP4Q8TDF6 673 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 CNOT6LQ96LI5 555 aaKnown RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 GSDMAQ96QA5 445 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 MYO1AQ9UBC5 1043 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 A0A087WUV0 522 aaPredicted RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 TRIM49BA6NDI0 452 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 TBC1D8O95759 1140 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 FDPSP14324 419 aaKnown RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 MAP3K9P80192 1104 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 ICE2Q659A1 982 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 ARHGEF25Q86VW2 580 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 KRT12Q99456 494 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 LSM14BQ9BX40 385 aaKnown RBP7.89□□□□□ -1.15
USP3-210ENST00000559192 SLC39A2Q9NP94 309 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 ZNF446Q9NWS9 450 aa7.89□□□□□ -1.15
USP3-210ENST00000559192 H7C1D1 291 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 PDE8AO60658 829 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 PPFIA4O75335 1185 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 CIAO1O76071 339 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 DNM2P50570 870 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 MXRA7P84157 204 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 IFT88Q13099 833 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 CUL4BQ13620 913 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 INF2Q27J81 1249 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 SLC9C1Q4G0N8 1177 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 SFMBT2Q5VUG0 894 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 PPFIBP2Q8ND30 876 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 JPH2Q9BR39 696 aaPredicted RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 GPR108Q9NPR9 543 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 TBCAO75347 108 aaKnown RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 GNAQP50148 359 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 TCIRG1Q13488 830 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 PICALMQ13492 652 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 DIXDC1Q155Q3 683 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 PNMA8AQ86V59 439 aaPredicted RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 REXO1L1PQ8IX06 675 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 LMBR1Q8WVP7 490 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 TUBGCP2Q9BSJ2 902 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 RWDD2AQ9UIY3 292 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 ABCA9Q8IUA7 1624 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 A0A1W2PRG0 241 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 KCNK3O14649 394 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 TECP42680 631 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 LACTBP83111 547 aaPredicted RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 DNAJC10Q8IXB1 793 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 TBC1D5Q92609 795 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 L2HGDHQ9H9P8 463 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 UTP11Q9Y3A2 253 aaKnown RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 CEP170BQ9Y4F5 1589 aaPredicted RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 UBN2Q6ZU65 1347 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 BAG3O95817 575 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 NNTQ13423 1086 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 RBBP5Q15291 538 aaKnown RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 ZNF658Q5TYW1 1059 aaPredicted RBP7.88□□□□□ -1.15
USP3-210ENST00000559192 USPL1Q5W0Q7 1092 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 TADA2BQ86TJ2 420 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 LCORLQ8N3X6 602 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 TBC1D31Q96DN5 1066 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 STIM2Q9P246 746 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 TRIM10Q9UDY6 481 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 BAIAP2L1Q9UHR4 511 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 GDAQ9Y2T3 454 aa7.88□□□□□ -1.15
USP3-210ENST00000559192 GUCY1A2P33402 732 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 SYCP3Q8IZU3 236 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 TC2NQ8N9U0 490 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 EPB41L5Q9HCM4 733 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 KIDINS220Q9ULH0 1771 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 ATP1A1P05023 1023 aaKnown RBP7.87□□□□□ -1.15
USP3-210ENST00000559192 PEX19P40855 299 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 MCAMP43121 646 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 KLHL30Q0D2K2 578 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 CCDC26Q8TAB7 109 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 TMEM51Q9NW97 253 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 PLEKHG1Q9ULL1 1385 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 ADGRL3Q9HAR2 1447 aa7.87□□□□□ -1.15
USP3-210ENST00000559192 EIF6P56537 245 aaKnown RBP7.87□□□□□ -1.15
USP3-210ENST00000559192 PDCLQ13371 301 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms