RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ENPP3O14638 875 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 ACRP10323 421 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 RAP1GAPP47736 663 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 MTERF2Q49AM1 385 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 FBLN7Q53RD9 439 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 CDKAL1Q5VV42 579 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 VHLLQ6RSH7 139 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 UNC5AQ6ZN44 842 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 RUFY4Q6ZNE9 571 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 DTWD2Q8NBA8 298 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 PIWIL2Q8TC59 973 aaKnown RBP6.45□□□□□ -1.38
CASC4-206ENST00000558847 SMARCC1Q92922 1105 aaPredicted RBP6.45□□□□□ -1.38
CASC4-206ENST00000558847 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.45□□□□□ -1.38
CASC4-206ENST00000558847 ST7Q9NRC1 585 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 SEMA3GQ9NS98 782 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 IQCA1LA6NCM1 817 aa6.44□□□□□ -1.38
CASC4-206ENST00000558847 GJB6O95452 261 aa6.44□□□□□ -1.38
CASC4-206ENST00000558847 ZNF143P52747 638 aaPredicted RBP6.44□□□□□ -1.38
CASC4-206ENST00000558847 SLC7A5Q01650 507 aa6.44□□□□□ -1.38
CASC4-206ENST00000558847 MESP2Q0VG99 397 aa6.44□□□□□ -1.38
CASC4-206ENST00000558847 JAZF1Q86VZ6 243 aa6.44□□□□□ -1.38
CASC4-206ENST00000558847 KIRREL1Q96J84 757 aa6.44□□□□□ -1.38
CASC4-206ENST00000558847 HSPA12BQ96MM6 686 aa6.44□□□□□ -1.38
CASC4-206ENST00000558847 SLC9A7Q96T83 725 aa6.44□□□□□ -1.38
CASC4-206ENST00000558847 MRPL42Q9Y6G3 142 aaKnown RBP6.44□□□□□ -1.38
CASC4-206ENST00000558847 FAM221BA6H8Z2 402 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 ANKRD62A6NC57 917 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 AGRPO00253 132 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 LRRN2O75325 713 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 GBP1P32455 592 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 TMEM67Q5HYA8 995 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 FYB2Q5VWT5 728 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 C6orf15Q6UXA7 325 aaPredicted RBP6.43□□□□□ -1.38
CASC4-206ENST00000558847 SPOCD1Q6ZMY3 1216 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 THAP5Q7Z6K1 395 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 TOX2Q96NM4 488 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 PPP1R16BQ96T49 567 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 SLKQ9H2G2 1235 aaPredicted RBP6.43□□□□□ -1.38
CASC4-206ENST00000558847 ATP13A1Q9HD20 1204 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 LMCD1Q9NZU5 365 aa6.43□□□□□ -1.38
CASC4-206ENST00000558847 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
CASC4-206ENST00000558847 H3BS24 57 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 CLEC3AO75596 197 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 GLI1P08151 1106 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 SRFP11831 508 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 PMS1P54277 932 aaKnown RBP6.42□□□□□ -1.38
CASC4-206ENST00000558847 RNF4P78317 190 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 GNPTABQ3T906 1256 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 ZC3H12BQ5HYM0 836 aaKnown RBP6.42□□□□□ -1.38
CASC4-206ENST00000558847 EGFLAMQ63HQ2 1017 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 HOMER1Q86YM7 354 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 NLGN1Q8N2Q7 840 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 BHLHE22Q8NFJ8 381 aaPredicted RBP6.42□□□□□ -1.38
CASC4-206ENST00000558847 THAP3Q8WTV1 239 aaPredicted RBP6.42□□□□□ -1.38
CASC4-206ENST00000558847 APPBP2Q92624 585 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 RNPC3Q96LT9 517 aaKnown RBP6.42□□□□□ -1.38
CASC4-206ENST00000558847 DNAJC7Q99615 494 aa6.42□□□□□ -1.38
CASC4-206ENST00000558847 ZYXQ15942 572 aaKnown RBP6.41□□□□□ -1.38
CASC4-206ENST00000558847 LONRF2Q1L5Z9 754 aa6.41□□□□□ -1.38
CASC4-206ENST00000558847 GAB4Q2WGN9 574 aa6.41□□□□□ -1.38
CASC4-206ENST00000558847 NBPF12Q5TAG4 269 aaPredicted RBP6.41□□□□□ -1.38
CASC4-206ENST00000558847 PRR23BQ6ZRT6 265 aa6.41□□□□□ -1.38
CASC4-206ENST00000558847 SYDE1Q6ZW31 735 aaPredicted RBP6.41□□□□□ -1.38
CASC4-206ENST00000558847 LRRC47Q8N1G4 583 aaKnown RBP6.41□□□□□ -1.38
CASC4-206ENST00000558847 SYNPOQ8N3V7 929 aa6.41□□□□□ -1.38
CASC4-206ENST00000558847 ZSCAN18Q8TBC5 510 aaPredicted RBP6.41□□□□□ -1.38
CASC4-206ENST00000558847 SH3TC2Q8TF17 1288 aa6.41□□□□□ -1.38
CASC4-206ENST00000558847 SLC6A18Q96N87 628 aa6.41□□□□□ -1.38
CASC4-206ENST00000558847 GPR62Q9BZJ7 368 aa6.41□□□□□ -1.38
CASC4-206ENST00000558847 DUSP15Q9H1R2 295 aaPredicted RBP6.41□□□□□ -1.38
CASC4-206ENST00000558847 SUCOQ9UBS9 1254 aaKnown RBP6.41□□□□□ -1.38
CASC4-206ENST00000558847 SHISA3A0PJX4 238 aa6.4□□□□□ -1.38
CASC4-206ENST00000558847 CDC45O75419 566 aa6.4□□□□□ -1.38
CASC4-206ENST00000558847 SSRP1Q08945 709 aaKnown RBP6.4□□□□□ -1.38
CASC4-206ENST00000558847 C2orf27AQ580R0 203 aa6.4□□□□□ -1.38
CASC4-206ENST00000558847 PLEKHG4Q58EX7 1191 aa6.4□□□□□ -1.38
CASC4-206ENST00000558847 RNF187Q5TA31 235 aaPredicted RBP6.4□□□□□ -1.38
CASC4-206ENST00000558847 KIAA1211LQ6NV74 962 aa6.4□□□□□ -1.38
CASC4-206ENST00000558847 ANKLE2Q86XL3 938 aa6.4□□□□□ -1.38
CASC4-206ENST00000558847 SGSM3Q96HU1 749 aa6.4□□□□□ -1.38
CASC4-206ENST00000558847 CWC22Q9HCG8 908 aaKnown RBP6.4□□□□□ -1.38
CASC4-206ENST00000558847 LTBP3Q9NS15 1303 aa6.4□□□□□ -1.39
CASC4-206ENST00000558847 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 WASH4PA8MWX3 477 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 SUSD5O60279 629 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 PPFIBP1Q86W92 1011 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 JMYQ8N9B5 988 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 MICAL1Q8TDZ2 1067 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 ZNF512BQ96KM6 892 aaPredicted RBP6.39□□□□□ -1.39
CASC4-206ENST00000558847 SLC26A8Q96RN1 970 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 DIRC2Q96SL1 478 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 GBP3Q9H0R5 595 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 ZMYM5Q9UJ78 669 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 KCNH3Q9ULD8 1083 aa6.39□□□□□ -1.39
CASC4-206ENST00000558847 CCDC163A0A0D9SF12 145 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 FAM86C2PA6NEL3 165 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 B2RBV5 119 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms