RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 IQCB1Q15051 598 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 LRRC36Q1X8D7 754 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 NCAPH2Q6IBW4 605 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CRACR2BQ8N4Y2 399 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 MYO1AQ9UBC5 1043 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CUL4AQ13619 759 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 HIPK4Q8NE63 616 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PALD1Q9ULE6 856 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 HP1BP3Q5SSJ5 553 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SRLQ86TD4 932 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ACRBPQ8NEB7 543 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 LRRC37BQ96QE4 947 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 MMS19Q96T76 1030 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SOGA1O94964 1423 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SOWAHDA6NJG2 315 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 AP1G2O75843 785 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ESRRBO95718 433 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PARP1P09874 1014 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC152Q4G0S7 254 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PDLIM2Q96JY6 352 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CSRNP2Q9H175 543 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 DDX20Q9UHI6 824 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 MRPL12P52815 198 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 POLR3CQ9BUI4 534 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 XAB2Q9HCS7 855 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 MAN1B1Q9UKM7 699 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PPP4R1Q8TF05 950 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ANGPTL2Q9UKU9 493 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SH3BP5O60239 455 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PDHBP11177 359 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 KLC1Q07866 573 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 LRRC41Q15345 812 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 THAP11Q96EK4 314 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 C6orf50Q9HD87 102 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ASIC3Q9UHC3 531 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC159P0C7I6 412 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 WTAPQ15007 396 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 L1RE1Q9UN81 338 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ARL2BPQ9Y2Y0 163 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 TEX33O43247 280 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CNGA1P29973 690 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 C11orf57Q6ZUT1 292 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 TESK2Q96S53 571 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CALML3P27482 149 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ARMCX5Q6P1M9 558 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 LMBR1LQ6UX01 489 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 C10orf88Q9H8K7 445 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 HEATR3Q7Z4Q2 680 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ARL8AQ96BM9 186 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 MTA3Q9BTC8 594 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 GNAT1P11488 350 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 KRT5P13647 590 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 RILPL1Q5EBL4 403 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SLC4A8Q2Y0W8 1093 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CHMP6Q96FZ7 201 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 IRX2Q9BZI1 471 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 KDM4CQ9H3R0 1056 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 TRPC5Q9UL62 973 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 NACADO15069 1562 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CFAP73A6NFT4 308 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 RPN1P04843 607 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 TATP17735 454 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 KRT24Q2M2I5 525 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PIK3AP1Q6ZUJ8 805 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PDE1BQ01064 536 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SWT1Q5T5J6 900 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 EPM2AIP1Q7L775 607 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 FAM133AQ8N9E0 248 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PAIP1Q9H074 479 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 NHEJ1Q9H9Q4 299 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ATP11BQ9Y2G3 1177 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 C1orf146Q5VVC0 180 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PPWD1Q96BP3 646 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SH2D4AQ9H788 454 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 KBTBD12Q3ZCT8 623 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PARP2Q9UGN5 583 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 USP19O94966 1318 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SPOPO43791 374 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 MAN1A2O60476 641 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ZNF449Q6P9G9 518 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PCDHB13Q9Y5F0 798 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 NDC80O14777 642 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CAND2O75155 1236 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ALDH1L1O75891 902 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 LDHCP07864 332 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 UBAP1Q9NZ09 502 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 GOLGA4Q13439 2230 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 PTPDC1A2A3K4 754 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 B4DLN1 442 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 BIRC3Q13489 604 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 BEND6Q5SZJ8 279 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 DYMQ7RTS9 669 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ST13P4Q8IZP2 240 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 CARMIL1Q5VZK9 1371 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SGSM2O43147 1006 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 DKC1O60832 514 aaKnown RBP eCLIP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 GJC1P36383 396 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 ATP6V1G3Q96LB4 118 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms