RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 BRD1O95696 1058 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 GJB2P29033 226 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 SPP2Q13103 211 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 CLEC17AQ6ZS10 378 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 CRYGNQ8WXF5 182 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 LZTS2Q9BRK4 669 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 GJB4Q9NTQ9 266 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 PRR12Q9ULL5 1215 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 MTMR6Q9Y217 621 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 CLEC11AQ9Y240 323 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 FRMPD4Q14CM0 1322 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 ERICH2A1L162 156 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 KLRF2D3W0D1 207 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 IGHA2P01877 340 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 PARP1P09874 1014 aaKnown RBP7.86□□□□□ -1.15
LINC00517-202ENST00000554257 BMP3P12645 472 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 WWC2Q6AWC2 1192 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 R3HDMLQ9H3Y0 253 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 SLC38A10Q9HBR0 1119 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 FBXO28Q9NVF7 368 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 AGTPBP1Q9UPW5 1226 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 BRCA2P51587 3418 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 LOXHD1Q8IVV2 1947 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
LINC00517-202ENST00000554257 HMGCS2P54868 508 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 DAGLBQ8NCG7 672 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 ZIC5Q96T25 663 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 RPAP3Q9H6T3 665 aaPredicted RBP7.86□□□□□ -1.15
LINC00517-202ENST00000554257 AS3MTQ9HBK9 375 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 ZNF214Q9UL59 606 aaPredicted RBP7.86□□□□□ -1.15
LINC00517-202ENST00000554257 PPP1R9AQ9ULJ8 1098 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 KIF28PB7ZC32 967 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 TAL1P17542 331 aaPredicted RBP7.86□□□□□ -1.15
LINC00517-202ENST00000554257 USP14P54578 494 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 SPICE1Q8N0Z3 855 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 FAM177A1Q8N128 213 aaPredicted RBP7.86□□□□□ -1.15
LINC00517-202ENST00000554257 CLEC4DQ8WXI8 215 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 TRIM34Q9BYJ4 488 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 CREBZFQ9NS37 354 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 FEM1BQ9UK73 627 aa7.86□□□□□ -1.15
LINC00517-202ENST00000554257 TMEM88BA6NKF7 163 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 SYT1P21579 422 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 DSG3P32926 999 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 SLC16A2P36021 539 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 ANP32AP39687 249 aaKnown RBP7.85□□□□□ -1.15
LINC00517-202ENST00000554257 RESTQ13127 1097 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 NFXL1Q6ZNB6 911 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 UBA5Q9GZZ9 404 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 SH3GLB2Q9NR46 395 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 PICK1Q9NRD5 415 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 BARHL2Q9NY43 387 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 TRIM75PA6NK02 468 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 NF2P35240 595 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 EARS2Q5JPH6 523 aaKnown RBP7.85□□□□□ -1.15
LINC00517-202ENST00000554257 SYDE2Q5VT97 1194 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 ANKRD23Q86SG2 305 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 OTUD5Q96G74 571 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 PIGSQ96S52 555 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 CFHR5Q9BXR6 569 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 CSADQ9Y600 493 aa7.85□□□□□ -1.15
LINC00517-202ENST00000554257 ESYT2A0FGR8 921 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 IGF2BP3O00425 579 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC00517-202ENST00000554257 VWA5AO00534 786 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 DEXIO95424 95 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 U2AF2P26368 475 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC00517-202ENST00000554257 TM4SF4P48230 202 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 FAM43AQ8N2R8 423 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 C2orf69Q8N8R5 385 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 ZMYND12Q9H0C1 365 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 SH2D4AQ9H788 454 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 CWC22Q9HCG8 908 aaKnown RBP7.84□□□□□ -1.15
LINC00517-202ENST00000554257 ZCCHC17Q9NP64 241 aaKnown RBP7.84□□□□□ -1.15
LINC00517-202ENST00000554257 BTBD7Q9P203 1132 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 ASTN1O14525 1302 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 hCG_1642624A0A1W2PR95 340 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 BTBD19C9JJ37 291 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 WNT7AO00755 349 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 ZBTB5O15062 677 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 SCG2P13521 617 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 KIF5BP33176 963 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 SLC1A4P43007 532 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 APLP1P51693 650 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 STAT2P52630 851 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 HMGN5P82970 282 aaKnown RBP7.84□□□□□ -1.15
LINC00517-202ENST00000554257 CAP1Q01518 475 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 TMEM132BQ14DG7 1078 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 QRICH1Q2TAL8 776 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 NOM1Q5C9Z4 860 aaKnown RBP7.84□□□□□ -1.15
LINC00517-202ENST00000554257 RGMBQ6NW40 437 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 FAM160B2Q86V87 743 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 FBXO18Q8NFZ0 1043 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 NUP133Q8WUM0 1156 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 TXNRD2Q9NNW7 524 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 GPCPD1Q9NPB8 672 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.84□□□□□ -1.15
LINC00517-202ENST00000554257 PNMA6FA0A0J9YX94 578 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 TMEM232C9JQI7 657 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 PPFIA3O75145 1194 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 MMP1P03956 469 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 GNAQP50148 359 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms