RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 MSL3Q8N5Y2 521 aaKnown RBP12.74□□□□□ -0.37
PNN-203ENST00000554117 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
PNN-203ENST00000554117 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
PNN-203ENST00000554117 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
PNN-203ENST00000554117 CRBNQ96SW2 442 aa12.74□□□□□ -0.37
PNN-203ENST00000554117 TINF2Q9BSI4 451 aa12.74□□□□□ -0.37
PNN-203ENST00000554117 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
PNN-203ENST00000554117 FBXO28Q9NVF7 368 aa12.74□□□□□ -0.37
PNN-203ENST00000554117 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
PNN-203ENST00000554117 NDUFB10O96000 172 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 COL6A1P12109 1028 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 SLC1A4P43007 532 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 MAGEA10P43363 369 aaPredicted RBP12.73□□□□□ -0.37
PNN-203ENST00000554117 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
PNN-203ENST00000554117 OAZ1P54368 228 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 SLFN13Q68D06 897 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 CHST13Q8NET6 341 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 NEDD1Q8NHV4 660 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 MKL1Q969V6 931 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 EPB41L4AQ9HCS5 686 aaPredicted RBP12.73□□□□□ -0.37
PNN-203ENST00000554117 XPNPEP3Q9NQH7 507 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 MTMR4Q9NYA4 1195 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 ATP11BQ9Y2G3 1177 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 LRRC37A2A6NM11 1700 aa12.73□□□□□ -0.37
PNN-203ENST00000554117 LCTP09848 1927 aa12.72□□□□□ -0.37
PNN-203ENST00000554117 RANBP6O60518 1105 aaKnown RBP12.72□□□□□ -0.37
PNN-203ENST00000554117 COBLO75128 1261 aa12.72□□□□□ -0.37
PNN-203ENST00000554117 PGK2P07205 417 aa12.72□□□□□ -0.37
PNN-203ENST00000554117 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
PNN-203ENST00000554117 LRRC26Q2I0M4 334 aa12.72□□□□□ -0.37
PNN-203ENST00000554117 ANO1Q5XXA6 986 aa12.72□□□□□ -0.37
PNN-203ENST00000554117 LRRC47Q8N1G4 583 aaKnown RBP12.72□□□□□ -0.37
PNN-203ENST00000554117 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
PNN-203ENST00000554117 SEC62Q99442 399 aaKnown RBP12.72□□□□□ -0.37
PNN-203ENST00000554117 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
PNN-203ENST00000554117 GDF15Q99988 308 aa12.72□□□□□ -0.37
PNN-203ENST00000554117 PRDM5Q9NQX1 630 aaPredicted RBP12.72□□□□□ -0.37
PNN-203ENST00000554117 ZNF214Q9UL59 606 aaPredicted RBP12.72□□□□□ -0.37
PNN-203ENST00000554117 GBF1Q92538 1859 aa12.72□□□□□ -0.37
PNN-203ENST00000554117 SYNGAP1Q96PV0 1343 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 ATP2A1O14983 1001 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
PNN-203ENST00000554117 RTP1P59025 263 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 MDM2Q00987 491 aaPredicted RBP12.71□□□□□ -0.37
PNN-203ENST00000554117 MCMDC2Q4G0Z9 681 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 FAM47AQ5JRC9 791 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 MPHOSPH6Q99547 160 aaKnown RBP12.71□□□□□ -0.37
PNN-203ENST00000554117 ACAD9Q9H845 621 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
PNN-203ENST00000554117 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.37
PNN-203ENST00000554117 MROH7Q68CQ1 1323 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 IGKV6D-41A0A0C4DH26 115 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 SMIM22K7EJ46 135 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 HIP1O00291 1037 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 PDE1AP54750 535 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 CCDC96Q2M329 555 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 ZNF792Q3KQV3 632 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 TKFCQ3LXA3 575 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 RRP12Q5JTH9 1297 aaKnown RBP12.7□□□□□ -0.38
PNN-203ENST00000554117 PRAMEF19Q5SWL8 479 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 ZNF467Q7Z7K2 595 aaPredicted RBP12.7□□□□□ -0.38
PNN-203ENST00000554117 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.38
PNN-203ENST00000554117 PRO3102Q9H379 93 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 ABHD16BQ9H3Z7 469 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
PNN-203ENST00000554117 SLC38A10Q9HBR0 1119 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
PNN-203ENST00000554117 PNMA2Q9UL42 364 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
PNN-203ENST00000554117 PCP11498 1178 aaKnown RBP12.69□□□□□ -0.38
PNN-203ENST00000554117 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 CTDSPL2Q05D32 466 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 LRRC41Q15345 812 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 LRIT3Q3SXY7 679 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 PCSK9Q8NBP7 692 aaKnown RBP12.69□□□□□ -0.38
PNN-203ENST00000554117 STAG1Q8WVM7 1258 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 VTI1AQ96AJ9 217 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 GMCL1Q96IK5 515 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 LNPKQ9C0E8 428 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
PNN-203ENST00000554117 KAT6AQ92794 2004 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 ASB14A6NK59 587 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 NT5C2P49902 561 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 RCSD1Q6JBY9 416 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 MFSD6Q6ZSS7 791 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 NOL8Q76FK4 1167 aaKnown RBP12.68□□□□□ -0.38
PNN-203ENST00000554117 REPS2Q8NFH8 660 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 OTUD7AQ8TE49 926 aaPredicted RBP12.68□□□□□ -0.38
PNN-203ENST00000554117 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 FERMT2Q96AC1 680 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 GLT1D1Q96MS3 346 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms