RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 UBE2Q1Q7Z7E8 422 aa24.4■■□□□ 1.5
HIF1A-206ENST00000553999 SKAP1Q86WV1 359 aa24.4■■□□□ 1.5
HIF1A-206ENST00000553999 ZKSCAN3Q9BRR0 538 aa24.4■■□□□ 1.5
HIF1A-206ENST00000553999 HOMER2Q9NSB8 354 aa24.4■■□□□ 1.5
HIF1A-206ENST00000553999 RIPK3Q9Y572 518 aa24.4■■□□□ 1.5
HIF1A-206ENST00000553999 ZBED4O75132 1171 aa24.39■■□□□ 1.49
HIF1A-206ENST00000553999 SLC25A27O95847 323 aa24.39■■□□□ 1.49
HIF1A-206ENST00000553999 TAL1P17542 331 aaPredicted RBP24.39■■□□□ 1.49
HIF1A-206ENST00000553999 KCTD2Q14681 263 aa24.39■■□□□ 1.49
HIF1A-206ENST00000553999 PRAMEF19Q5SWL8 479 aa24.39■■□□□ 1.49
HIF1A-206ENST00000553999 MFSD6Q6ZSS7 791 aa24.39■■□□□ 1.49
HIF1A-206ENST00000553999 PRPF38AQ8NAV1 312 aaKnown RBP24.39■■□□□ 1.49
HIF1A-206ENST00000553999 TRPV1Q8NER1 839 aa24.39■■□□□ 1.49
HIF1A-206ENST00000553999 FEM1BQ9UK73 627 aa24.39■■□□□ 1.49
HIF1A-206ENST00000553999 FRMPD2Q68DX3 1309 aaPredicted RBP24.38■■□□□ 1.49
HIF1A-206ENST00000553999 ZNF236Q9UL36 1845 aa24.38■■□□□ 1.49
HIF1A-206ENST00000553999 HIP1O00291 1037 aa24.38■■□□□ 1.49
HIF1A-206ENST00000553999 STRNO43815 780 aa24.38■■□□□ 1.49
HIF1A-206ENST00000553999 MYCNP04198 464 aaPredicted RBP24.38■■□□□ 1.49
HIF1A-206ENST00000553999 HOXC6P09630 235 aa24.38■■□□□ 1.49
HIF1A-206ENST00000553999 AKNAD1Q5T1N1 836 aa24.38■■□□□ 1.49
HIF1A-206ENST00000553999 HTATIP2Q9BUP3 242 aa24.38■■□□□ 1.49
HIF1A-206ENST00000553999 TEX13BQ9BXU2 312 aa24.38■■□□□ 1.49
HIF1A-206ENST00000553999 PCDH10Q9P2E7 1040 aa24.38■■□□□ 1.49
HIF1A-206ENST00000553999 ZMYM6O95789 1325 aa24.37■■□□□ 1.49
HIF1A-206ENST00000553999 ZNF213O14771 459 aa24.37■■□□□ 1.49
HIF1A-206ENST00000553999 CCDC174Q6PII3 467 aa24.37■■□□□ 1.49
HIF1A-206ENST00000553999 STAT2P52630 851 aa24.36■■□□□ 1.49
HIF1A-206ENST00000553999 NECAB2Q7Z6G3 386 aa24.36■■□□□ 1.49
HIF1A-206ENST00000553999 STAG1Q8WVM7 1258 aa24.36■■□□□ 1.49
HIF1A-206ENST00000553999 MAML3Q96JK9 1138 aa24.36■■□□□ 1.49
HIF1A-206ENST00000553999 GPCPD1Q9NPB8 672 aa24.36■■□□□ 1.49
HIF1A-206ENST00000553999 FGRP09769 529 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 CYBAP13498 195 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 SLC16A2P36021 539 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 TTBK2Q6IQ55 1244 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 TICAM2Q86XR7 235 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 TMEM47Q9BQJ4 181 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 SLC38A10Q9HBR0 1119 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 SLC5A4Q9NY91 659 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 OGDHLQ9ULD0 1010 aa24.35■■□□□ 1.49
HIF1A-206ENST00000553999 MNX1P50219 401 aaPredicted RBP24.34■■□□□ 1.49
HIF1A-206ENST00000553999 LHX8Q68G74 356 aa24.34■■□□□ 1.49
HIF1A-206ENST00000553999 ABRAQ8N0Z2 381 aa24.34■■□□□ 1.49
HIF1A-206ENST00000553999 DDX11Q96FC9 970 aa24.34■■□□□ 1.49
HIF1A-206ENST00000553999 GMCL1Q96IK5 515 aa24.34■■□□□ 1.49
HIF1A-206ENST00000553999 C11orf49Q9H6J7 331 aa24.34■■□□□ 1.49
HIF1A-206ENST00000553999 DDX20Q9UHI6 824 aaKnown RBP24.34■■□□□ 1.49
HIF1A-206ENST00000553999 SYNPO2Q9UMS6 1093 aa24.34■■□□□ 1.49
HIF1A-206ENST00000553999 B4E1Z4 1266 aa24.33■■□□□ 1.49
HIF1A-206ENST00000553999 KDM4AO75164 1064 aa24.33■■□□□ 1.49
HIF1A-206ENST00000553999 PPP4R3BQ5MIZ7 849 aa24.33■■□□□ 1.49
HIF1A-206ENST00000553999 OLFML2BQ68BL8 750 aa24.33■■□□□ 1.49
HIF1A-206ENST00000553999 C7orf61Q8IZ16 206 aa24.33■■□□□ 1.49
HIF1A-206ENST00000553999 AGBL1Q96MI9 1066 aa24.33■■□□□ 1.49
HIF1A-206ENST00000553999 RNF41Q9H4P4 317 aaPredicted RBP24.33■■□□□ 1.49
HIF1A-206ENST00000553999 EVI5O60447 810 aa24.32■■□□□ 1.48
HIF1A-206ENST00000553999 RCSD1Q6JBY9 416 aa24.32■■□□□ 1.48
HIF1A-206ENST00000553999 FAM160B2Q86V87 743 aa24.32■■□□□ 1.48
HIF1A-206ENST00000553999 ESR2Q92731 530 aa24.32■■□□□ 1.48
HIF1A-206ENST00000553999 DSCC1Q9BVC3 393 aa24.32■■□□□ 1.48
HIF1A-206ENST00000553999 LAMA4Q16363 1823 aa24.32■■□□□ 1.48
HIF1A-206ENST00000553999 TOP1P11387 765 aaKnown RBP24.31■■□□□ 1.48
HIF1A-206ENST00000553999 COPB2P35606 906 aa24.31■■□□□ 1.48
HIF1A-206ENST00000553999 IMMTQ16891 758 aaKnown RBP24.31■■□□□ 1.48
HIF1A-206ENST00000553999 ZNF792Q3KQV3 632 aa24.31■■□□□ 1.48
HIF1A-206ENST00000553999 ANKRD35Q8N283 1001 aa24.31■■□□□ 1.48
HIF1A-206ENST00000553999 CHURC1Q8WUH1 139 aa24.31■■□□□ 1.48
HIF1A-206ENST00000553999 PRR12Q9ULL5 1215 aa24.31■■□□□ 1.48
HIF1A-206ENST00000553999 FRMPD3Q5JV73 1810 aa24.31■■□□□ 1.48
HIF1A-206ENST00000553999 ALAS1P13196 640 aa24.3■■□□□ 1.48
HIF1A-206ENST00000553999 CHMLP26374 656 aa24.3■■□□□ 1.48
HIF1A-206ENST00000553999 ANKLE1Q8NAG6 615 aa24.3■■□□□ 1.48
HIF1A-206ENST00000553999 LENG1Q96BZ8 264 aaPredicted RBP24.3■■□□□ 1.48
HIF1A-206ENST00000553999 RNF146Q9NTX7 359 aa24.3■■□□□ 1.48
HIF1A-206ENST00000553999 PFASO15067 1338 aa24.3■■□□□ 1.48
HIF1A-206ENST00000553999 PTH1RQ03431 593 aa24.29■■□□□ 1.48
HIF1A-206ENST00000553999 GJC2Q5T442 439 aaPredicted RBP24.29■■□□□ 1.48
HIF1A-206ENST00000553999 CHRDL2Q6WN34 429 aa24.29■■□□□ 1.48
HIF1A-206ENST00000553999 DCAF4Q8WV16 495 aa24.29■■□□□ 1.48
HIF1A-206ENST00000553999 ZMYND8Q9ULU4 1186 aaPredicted RBP24.29■■□□□ 1.48
HIF1A-206ENST00000553999 COLQQ9Y215 455 aaPredicted RBP24.29■■□□□ 1.48
HIF1A-206ENST00000553999 ALPK3Q96L96 1907 aa24.28■■□□□ 1.48
HIF1A-206ENST00000553999 ZNFX1Q9P2E3 1918 aaKnown RBP24.28■■□□□ 1.48
HIF1A-206ENST00000553999 GOLGA8HP0CJ92 632 aa24.28■■□□□ 1.48
HIF1A-206ENST00000553999 CPVLQ9H3G5 476 aa24.28■■□□□ 1.48
HIF1A-206ENST00000553999 TCP11L1Q9NUJ3 509 aa24.28■■□□□ 1.48
HIF1A-206ENST00000553999 ZNF536O15090 1300 aa24.28■■□□□ 1.48
HIF1A-206ENST00000553999 PLXNA1Q9UIW2 1896 aa24.28■■□□□ 1.48
HIF1A-206ENST00000553999 ATP2A1O14983 1001 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 IGHA2P01877 340 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 SYN1P17600 705 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 NOVP48745 357 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 RUFY2Q8WXA3 655 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 TINF2Q9BSI4 451 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 CTNNA3Q9UI47 895 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 ZHX1Q9UKY1 873 aaPredicted RBP24.27■■□□□ 1.48
HIF1A-206ENST00000553999 CCPG1Q9ULG6 757 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 NR2E3Q9Y5X4 410 aa24.27■■□□□ 1.48
HIF1A-206ENST00000553999 DDX49Q9Y6V7 483 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms