RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PPP1R12BO60237 982 aaPredicted RBP12.51□□□□□ -0.41
PABPN1-203ENST00000553960 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
PABPN1-203ENST00000553960 GDF11O95390 407 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 PTPRAP18433 802 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 BACE1P56817 501 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 PTPAQ15257 358 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 WWC2Q6AWC2 1192 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 BLIDQ8IZY5 108 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 JMYQ8N9B5 988 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
PABPN1-203ENST00000553960 ADAMTS5Q9UNA0 930 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 PTPRFP10586 1907 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 RLFQ13129 1914 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 LAD1O00515 517 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 ATP2A1O14983 1001 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 VEGFAP15692 232 aaPredicted RBP12.5□□□□□ -0.41
PABPN1-203ENST00000553960 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
PABPN1-203ENST00000553960 STAT2P52630 851 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 LDLRAD1Q5T700 205 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 SYDE2Q5VT97 1194 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 ANO1Q5XXA6 986 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 MIGA2Q7L4E1 593 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 KRT26Q7Z3Y9 468 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 KRT25Q7Z3Z0 450 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 FERMT3Q86UX7 667 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 ELOA2Q8IYF1 753 aaPredicted RBP12.5□□□□□ -0.41
PABPN1-203ENST00000553960 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 ACER1Q8TDN7 264 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 SPATA32Q96LK8 384 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 USP28Q96RU2 1077 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 RANBP17Q9H2T7 1088 aaKnown RBP12.5□□□□□ -0.41
PABPN1-203ENST00000553960 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 RIC8AQ9NPQ8 531 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 CEP131Q9UPN4 1083 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 CNPY2Q9Y2B0 182 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 SRCAPQ6ZRS2 3230 aa12.5□□□□□ -0.41
PABPN1-203ENST00000553960 UBE2Q2LH0YL09 131 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 CXCL11O14625 94 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
PABPN1-203ENST00000553960 SLURP2P0DP57 97 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 NF2P35240 595 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 TOB1P50616 345 aaPredicted RBP12.49□□□□□ -0.41
PABPN1-203ENST00000553960 OAZ1P54368 228 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 SHROOM1Q2M3G4 852 aaPredicted RBP12.49□□□□□ -0.41
PABPN1-203ENST00000553960 ARL6IP4Q66PJ3 421 aaKnown RBP12.49□□□□□ -0.41
PABPN1-203ENST00000553960 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 MOXD1Q6UVY6 613 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.49□□□□□ -0.41
PABPN1-203ENST00000553960 CLEC10AQ8IUN9 316 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 CMTR1Q8N1G2 835 aaKnown RBP12.49□□□□□ -0.41
PABPN1-203ENST00000553960 PRPF38AQ8NAV1 312 aaKnown RBP12.49□□□□□ -0.41
PABPN1-203ENST00000553960 PIGSQ96S52 555 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 PICK1Q9NRD5 415 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 GJB4Q9NTQ9 266 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 VPS54Q9P1Q0 977 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 AFG3L2Q9Y4W6 797 aa12.49□□□□□ -0.41
PABPN1-203ENST00000553960 FOSP01100 380 aaPredicted RBP12.48□□□□□ -0.41
PABPN1-203ENST00000553960 GOLGA8HP0CJ92 632 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 NCLP19338 710 aaKnown RBP12.48□□□□□ -0.41
PABPN1-203ENST00000553960 INPP5BP32019 993 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 PRPHP41219 470 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 ECE1P42892 770 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 IREB2P48200 963 aaKnown RBP12.48□□□□□ -0.41
PABPN1-203ENST00000553960 MRPL12P52815 198 aaKnown RBP12.48□□□□□ -0.41
PABPN1-203ENST00000553960 NLRP5P59047 1200 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 PPATQ06203 517 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 AP3B2Q13367 1082 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 AXDND1Q5T1B0 1012 aaPredicted RBP12.48□□□□□ -0.41
PABPN1-203ENST00000553960 OTUD7BQ6GQQ9 843 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
PABPN1-203ENST00000553960 ANKRD13AQ8IZ07 590 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 CCDC82Q8N4S0 544 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 CRYGNQ8WXF5 182 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 WRNIP1Q96S55 665 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 NAP1L4Q99733 375 aaKnown RBP12.48□□□□□ -0.41
PABPN1-203ENST00000553960 NOL7Q9UMY1 257 aaKnown RBP12.48□□□□□ -0.41
PABPN1-203ENST00000553960 KCNH4Q9UQ05 1017 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 OTOFQ9HC10 1997 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 LOC285556D6RIA3 1793 aa12.48□□□□□ -0.41
PABPN1-203ENST00000553960 SPTLC2O15270 562 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 PPP1R11O60927 126 aaPredicted RBP12.47□□□□□ -0.41
PABPN1-203ENST00000553960 LETM1O95202 739 aaPredicted RBP12.47□□□□□ -0.41
PABPN1-203ENST00000553960 PTPREP23469 700 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 CMA1P23946 247 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
PABPN1-203ENST00000553960 CCDC96Q2M329 555 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 KIAA1755Q5JYT7 1200 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 TTBK2Q6IQ55 1244 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 RBM43Q6ZSC3 357 aaKnown RBP12.47□□□□□ -0.41
PABPN1-203ENST00000553960 LDHDQ86WU2 507 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 ERO1BQ86YB8 467 aa12.47□□□□□ -0.41
PABPN1-203ENST00000553960 PROCA1Q8NCQ7 364 aaPredicted RBP12.47□□□□□ -0.41
PABPN1-203ENST00000553960 GPT2Q8TD30 523 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms