RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TYRO3Q06418 890 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 KRI1Q8N9T8 703 aaKnown RBP22.57■■□□□ 1.2
SSH1-209ENST00000551165 PCDHA6Q9UN73 950 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 PCDHA8Q9Y5H6 950 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 A0A1W2PRG0 241 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 ZNF202O95125 648 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 NAPAP54920 295 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 ZNF280AP59817 542 aaPredicted RBP22.57■■□□□ 1.2
SSH1-209ENST00000551165 MICALL2Q8IY33 904 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 COA7Q96BR5 231 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 NUP88Q99567 741 aaPredicted RBP22.57■■□□□ 1.2
SSH1-209ENST00000551165 HERC5Q9UII4 1024 aaKnown RBP22.57■■□□□ 1.2
SSH1-209ENST00000551165 HPSEQ9Y251 543 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 CUTAO60888 179 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 PPP1R11O60927 126 aaPredicted RBP22.56■■□□□ 1.2
SSH1-209ENST00000551165 PTPREP23469 700 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 TTC38Q5R3I4 469 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 RESP18Q5W5W9 173 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 SEC63Q9UGP8 760 aaKnown RBP22.56■■□□□ 1.2
SSH1-209ENST00000551165 ARFGEF1Q9Y6D6 1849 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 USP17L10C9JJH3 530 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 MYO1BO43795 1136 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 CCDC192P0DO97 292 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 TBC1D10BQ4KMP7 808 aaPredicted RBP22.56■■□□□ 1.2
SSH1-209ENST00000551165 SLFN13Q68D06 897 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 USP49Q70CQ1 688 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 SPON1Q9HCB6 807 aa22.56■■□□□ 1.2
SSH1-209ENST00000551165 FKBP1CQ5VVH2 108 aa22.55■■□□□ 1.2
SSH1-209ENST00000551165 FHDC1Q9C0D6 1143 aaPredicted RBP22.55■■□□□ 1.2
SSH1-209ENST00000551165 ZMYND12Q9H0C1 365 aa22.55■■□□□ 1.2
SSH1-209ENST00000551165 SMCO2A6NFE2 343 aa22.55■■□□□ 1.2
SSH1-209ENST00000551165 CCDC148Q8NFR7 591 aa22.55■■□□□ 1.2
SSH1-209ENST00000551165 CNOT7Q9UIV1 285 aaKnown RBP22.55■■□□□ 1.2
SSH1-209ENST00000551165 NOL7Q9UMY1 257 aaKnown RBP22.55■■□□□ 1.2
SSH1-209ENST00000551165 F5H6K3 240 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 ECE1P42892 770 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 KLRC3Q07444 240 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 FAM83AQ86UY5 434 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 SLC1A4P43007 532 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 RASA3Q14644 834 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 ARHGAP27Q6ZUM4 889 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 DAGLBQ8NCG7 672 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 ACER1Q8TDN7 264 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 CSRNP2Q9H175 543 aa22.54■■□□□ 1.2
SSH1-209ENST00000551165 SRPRBQ9Y5M8 271 aaKnown RBP22.54■■□□□ 1.2
SSH1-209ENST00000551165 MCM7P33993 719 aa22.53■■□□□ 1.2
SSH1-209ENST00000551165 SYKP43405 635 aa22.53■■□□□ 1.2
SSH1-209ENST00000551165 SDF4Q9BRK5 362 aa22.53■■□□□ 1.2
SSH1-209ENST00000551165 FAM237AA0A1B0GTK4 181 aa22.53■■□□□ 1.2
SSH1-209ENST00000551165 NDUFB10O96000 172 aa22.53■■□□□ 1.2
SSH1-209ENST00000551165 RPS12P25398 132 aaKnown RBP22.53■■□□□ 1.2
SSH1-209ENST00000551165 PTGDRQ13258 359 aa22.53■■□□□ 1.2
SSH1-209ENST00000551165 KIAA1755Q5JYT7 1200 aa22.53■■□□□ 1.2
SSH1-209ENST00000551165 GPATCH4Q5T3I0 446 aaKnown RBP22.53■■□□□ 1.2
SSH1-209ENST00000551165 CEP131Q9UPN4 1083 aa22.53■■□□□ 1.2
SSH1-209ENST00000551165 INF2Q27J81 1249 aa22.52■■□□□ 1.2
SSH1-209ENST00000551165 ANO6Q4KMQ2 910 aa22.52■■□□□ 1.2
SSH1-209ENST00000551165 CCDC84Q86UT8 332 aaPredicted RBP22.52■■□□□ 1.2
SSH1-209ENST00000551165 SPICE1Q8N0Z3 855 aa22.52■■□□□ 1.2
SSH1-209ENST00000551165 SNAP25P60880 206 aa22.52■■□□□ 1.19
SSH1-209ENST00000551165 PPP4R3BQ5MIZ7 849 aa22.52■■□□□ 1.19
SSH1-209ENST00000551165 SASS6Q6UVJ0 657 aa22.52■■□□□ 1.19
SSH1-209ENST00000551165 TMEM260Q9NX78 707 aa22.52■■□□□ 1.19
SSH1-209ENST00000551165 CCDC194A0A1B0GVG4 234 aa22.51■■□□□ 1.19
SSH1-209ENST00000551165 LONRF3Q496Y0 759 aa22.51■■□□□ 1.19
SSH1-209ENST00000551165 TEPSINQ96N21 525 aa22.51■■□□□ 1.19
SSH1-209ENST00000551165 KCNH3Q9ULD8 1083 aa22.51■■□□□ 1.19
SSH1-209ENST00000551165 ZBTB21Q9ULJ3 1066 aa22.51■■□□□ 1.19
SSH1-209ENST00000551165 PNMA6FA0A0J9YX94 578 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 CTAGE5O15320 804 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 IL17AQ16552 155 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 DPF2Q92785 391 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 DNAJC25Q9H1X3 360 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 BIN2Q9UBW5 565 aaPredicted RBP22.5■■□□□ 1.19
SSH1-209ENST00000551165 GALNT17Q6IS24 598 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 DCAF4Q8WV16 495 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 MTMR8Q96EF0 704 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 EPSTI1Q96J88 318 aa22.5■■□□□ 1.19
SSH1-209ENST00000551165 TRAPPC10P48553 1259 aa22.49■■□□□ 1.19
SSH1-209ENST00000551165 ATP2C1P98194 919 aaPredicted RBP22.49■■□□□ 1.19
SSH1-209ENST00000551165 JAKMIP3Q5VZ66 844 aa22.49■■□□□ 1.19
SSH1-209ENST00000551165 GMCL1P1Q8NEA9 526 aa22.49■■□□□ 1.19
SSH1-209ENST00000551165 GLIS2Q9BZE0 524 aaPredicted RBP22.49■■□□□ 1.19
SSH1-209ENST00000551165 C6orf50Q9HD87 102 aa22.49■■□□□ 1.19
SSH1-209ENST00000551165 HACL1Q9UJ83 578 aa22.49■■□□□ 1.19
SSH1-209ENST00000551165 TBC1D12O60347 775 aa22.49■■□□□ 1.19
SSH1-209ENST00000551165 C4orf32Q8N8J7 132 aa22.49■■□□□ 1.19
SSH1-209ENST00000551165 ZBTB5O15062 677 aa22.48■■□□□ 1.19
SSH1-209ENST00000551165 FOXN1O15353 648 aa22.48■■□□□ 1.19
SSH1-209ENST00000551165 LUZP1Q86V48 1076 aa22.48■■□□□ 1.19
SSH1-209ENST00000551165 CCDC12Q8WUD4 166 aaPredicted RBP22.48■■□□□ 1.19
SSH1-209ENST00000551165 A0A087X0B3 334 aa22.48■■□□□ 1.19
SSH1-209ENST00000551165 VWA3AA6NCI4 1184 aa22.48■■□□□ 1.19
SSH1-209ENST00000551165 QRICH1Q2TAL8 776 aa22.48■■□□□ 1.19
SSH1-209ENST00000551165 KIF4BQ2VIQ3 1234 aa22.48■■□□□ 1.19
SSH1-209ENST00000551165 C11orf57Q6ZUT1 292 aaPredicted RBP22.48■■□□□ 1.19
SSH1-209ENST00000551165 PDILTQ8N807 584 aa22.48■■□□□ 1.19
SSH1-209ENST00000551165 ZNF579Q8NAF0 562 aaKnown RBP22.48■■□□□ 1.19
SSH1-209ENST00000551165 TAL1P17542 331 aaPredicted RBP22.47■■□□□ 1.19
SSH1-209ENST00000551165 GNA11P29992 359 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms