RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 HOMER1Q86YM7 354 aa17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 MTFR1LQ9H019 292 aa17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 VAT1LQ9HCJ6 419 aa17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 GPCPD1Q9NPB8 672 aa17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 SEC63Q9UGP8 760 aaKnown RBP17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 SERTAD1Q9UHV2 236 aa17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
CALCOCO1-203ENST00000546443 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 POLR2DO15514 142 aaKnown RBP17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 PNOCQ13519 176 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 IL17AQ16552 155 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 SARM1Q6SZW1 724 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 SIAH1Q8IUQ4 282 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 MTMR14Q8NCE2 650 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 MTMR8Q96EF0 704 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 KANSL2Q9H9L4 492 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 ZNF70Q9UC06 446 aaPredicted RBP17.39■□□□□ 0.37
CALCOCO1-203ENST00000546443 A0A087X0B3 334 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 SMCO2A6NFE2 343 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 FOXN1O15353 648 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 EEF2P13639 858 aaKnown RBP17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 POLD1P28340 1107 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 MCM7P33993 719 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 PLCB2Q00722 1185 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 DLGAP5Q15398 846 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 GPATCH4Q5T3I0 446 aaKnown RBP17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 ARL6IP4Q66PJ3 421 aaKnown RBP17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 TTBK2Q6IQ55 1244 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 TMEM179Q6ZVK1 233 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 KRT25Q7Z3Z0 450 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 PLA2G4DQ86XP0 818 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 AGBL3Q8NEM8 1001 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 EPSTI1Q96J88 318 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 TRIM34Q9BYJ4 488 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 NAT10Q9H0A0 1025 aaKnown RBP17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 JMJD4Q9H9V9 463 aa17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
CALCOCO1-203ENST00000546443 CNTNAP1P78357 1384 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 GOLGA6L19H0YKK7 550 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 BIN1O00499 593 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 GNA11P29992 359 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 SEPT2Q15019 361 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 DCAF4Q8WV16 495 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 FAM151AQ8WW52 585 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 SYMPKQ92797 1274 aaKnown RBP17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 ZBED3Q96IU2 234 aaPredicted RBP17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 TMOD2Q9NZR1 351 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 ZKSCAN5Q9Y2L8 839 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 PCDHA5Q9Y5H7 936 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 PTMAP06454 111 aaKnown RBP17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 CLCN1P35523 988 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 ZNF75DP51815 510 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 CXCL9Q07325 125 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 RRP1BQ14684 758 aaKnown RBP17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 INF2Q27J81 1249 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 NT5DC1Q5TFE4 455 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 KANK3Q6NY19 840 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 PPP1R18Q6NYC8 613 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 ADGRF4Q8IZF3 695 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 AOPEPQ8N6M6 819 aa17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 HOOK1Q9UJC3 728 aaKnown RBP17.37■□□□□ 0.37
CALCOCO1-203ENST00000546443 VWA3AA6NCI4 1184 aa17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 TCP10L2B9ZVM9 353 aa17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 SARSP49591 514 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 JAG1P78504 1218 aa17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 POSTNQ15063 836 aa17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 NONOQ15233 471 aaKnown RBP eCLIP17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 ZRSR1Q15695 479 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 FKBP1CQ5VVH2 108 aa17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 SGIP1Q9BQI5 828 aa17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 HERC5Q9UII4 1024 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-203ENST00000546443 CLRN2A0PK11 232 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 BECN2A8MW95 431 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 PPP1R11O60927 126 aaPredicted RBP17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 GDF11O95390 407 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 ICA1Q05084 483 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 SLFN13Q68D06 897 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 OGFOD1Q8N543 542 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 PDILTQ8N807 584 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 COA7Q96BR5 231 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 DHX58Q96C10 678 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 CSRNP1Q96S65 589 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 TMEM60Q9H2L4 133 aa17.35■□□□□ 0.37
CALCOCO1-203ENST00000546443 NFKBIEO00221 500 aa17.34■□□□□ 0.37
CALCOCO1-203ENST00000546443 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
CALCOCO1-203ENST00000546443 CDC25BP30305 580 aa17.34■□□□□ 0.37
CALCOCO1-203ENST00000546443 LONP1P36776 959 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms