RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
YBX3-218ENST00000546298 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
YBX3-218ENST00000546298 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
YBX3-218ENST00000546298 TINF2Q9BSI4 451 aa11.09□□□□□ -0.63
YBX3-218ENST00000546298 SENP6Q9GZR1 1112 aaPredicted RBP11.09□□□□□ -0.63
YBX3-218ENST00000546298 PRO3102Q9H379 93 aa11.09□□□□□ -0.63
YBX3-218ENST00000546298 STX8Q9UNK0 236 aa11.09□□□□□ -0.63
YBX3-218ENST00000546298 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
YBX3-218ENST00000546298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
YBX3-218ENST00000546298 PFASO15067 1338 aa11.09□□□□□ -0.63
YBX3-218ENST00000546298 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 KBTBD13C9JR72 458 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 RANBP6O60518 1105 aaKnown RBP11.08□□□□□ -0.64
YBX3-218ENST00000546298 PGK2P07205 417 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 BMP8BP34820 402 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 IKQ13123 557 aaPredicted RBP11.08□□□□□ -0.64
YBX3-218ENST00000546298 PRAMEF19Q5SWL8 479 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 STAG1Q8WVM7 1258 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 GDF15Q99988 308 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 OSBPL3Q9H4L5 887 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 SLC38A10Q9HBR0 1119 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 RAVER2Q9HCJ3 691 aaKnown RBP11.08□□□□□ -0.64
YBX3-218ENST00000546298 TOMM22Q9NS69 142 aa11.08□□□□□ -0.64
YBX3-218ENST00000546298 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 HIP1O00291 1037 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 FOXP2O15409 715 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 PLA2G6O60733 806 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 FGAP02671 866 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 FGRP09769 529 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 HSPD1P10809 573 aaKnown RBP11.07□□□□□ -0.64
YBX3-218ENST00000546298 RARBP10826 455 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 PCP11498 1178 aaKnown RBP11.07□□□□□ -0.64
YBX3-218ENST00000546298 MCCP23508 829 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 STAT2P52630 851 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 NUCB1Q02818 461 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 NMIQ13287 307 aaPredicted RBP11.07□□□□□ -0.64
YBX3-218ENST00000546298 LRRC26Q2I0M4 334 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 TKFCQ3LXA3 575 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 VPS53Q5VIR6 699 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 RCSD1Q6JBY9 416 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
YBX3-218ENST00000546298 PLEKHM2Q8IWE5 1019 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 ANKRD35Q8N283 1001 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 EXOC6Q8TAG9 804 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 PRKAG2Q9UGJ0 569 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 CCDC171Q6TFL3 1326 aa11.07□□□□□ -0.64
YBX3-218ENST00000546298 HTTP42858 3142 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 IGHDP01880 384 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
YBX3-218ENST00000546298 AKR1A1P14550 325 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 SYN1P17600 705 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 SDSP20132 328 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 NT5C2P49902 561 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 GJC2Q5T442 439 aaPredicted RBP11.06□□□□□ -0.64
YBX3-218ENST00000546298 ANO1Q5XXA6 986 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 ZNF467Q7Z7K2 595 aaPredicted RBP11.06□□□□□ -0.64
YBX3-218ENST00000546298 RNF180Q86T96 592 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 RNF41Q9H4P4 317 aaPredicted RBP11.06□□□□□ -0.64
YBX3-218ENST00000546298 XPNPEP3Q9NQH7 507 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 IL17RBQ9NRM6 502 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 DIAPH3Q9NSV4 1193 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 TCP11L1Q9NUJ3 509 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 FAM184BQ9ULE4 1060 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 RIPK3Q9Y572 518 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 ZMYM6O95789 1325 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 SYNGAP1Q96PV0 1343 aa11.06□□□□□ -0.64
YBX3-218ENST00000546298 DNAJC25-GNG10A0A024R161 153 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 TOP1P11387 765 aaKnown RBP11.05□□□□□ -0.64
YBX3-218ENST00000546298 MAGEA10P43363 369 aaPredicted RBP11.05□□□□□ -0.64
YBX3-218ENST00000546298 NOVP48745 357 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 ATN1P54259 1190 aaPredicted RBP11.05□□□□□ -0.64
YBX3-218ENST00000546298 LRRC41Q15345 812 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 RRP12Q5JTH9 1297 aaKnown RBP11.05□□□□□ -0.64
YBX3-218ENST00000546298 MAMDC4Q6UXC1 1216 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 MFSD6Q6ZSS7 791 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 DCAF4Q8WV16 495 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 TTC14Q96N46 770 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 LBHD1Q9BQE6 289 aaPredicted RBP11.05□□□□□ -0.64
YBX3-218ENST00000546298 UBE2OQ9C0C9 1292 aaKnown RBP11.05□□□□□ -0.64
YBX3-218ENST00000546298 ACAD9Q9H845 621 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 INCENPQ9NQS7 918 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
YBX3-218ENST00000546298 SUPT16HQ9Y5B9 1047 aaKnown RBP11.05□□□□□ -0.64
YBX3-218ENST00000546298 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 NMT2O60551 498 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 ZNF865P0CJ78 1059 aaPredicted RBP11.04□□□□□ -0.64
YBX3-218ENST00000546298 ADCYAP1R1P41586 468 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 RTP1P59025 263 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 CCDC96Q2M329 555 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 CCDC178Q5BJE1 867 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 AKNAD1Q5T1N1 836 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 SLC39A5Q6ZMH5 540 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 KCTD1Q719H9 257 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 ZNF589Q86UQ0 364 aaPredicted RBP11.04□□□□□ -0.64
YBX3-218ENST00000546298 ABHD16BQ9H3Z7 469 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 RNF146Q9NTX7 359 aa11.04□□□□□ -0.64
YBX3-218ENST00000546298 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms