RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 OXER1Q8TDS5 423 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 CTAGE1Q96RT6 745 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 TUBB2BQ9BVA1 445 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
DDB1-224ENST00000545894 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 TOMM22Q9NS69 142 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 TMEM51Q9NW97 253 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 CDC23Q9UJX2 597 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 MAP2K7O14733 419 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 MFAP3LO75121 409 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 CUL4BQ13620 913 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 HNRNPLLQ8WVV9 542 aaKnown RBP12.99□□□□□ -0.33
DDB1-224ENST00000545894 NACAP1Q9BZK3 213 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 ZSWIM4Q9H7M6 989 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 ADD3Q9UEY8 706 aaKnown RBP12.99□□□□□ -0.33
DDB1-224ENST00000545894 FER1L6Q2WGJ9 1857 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 TRIM75PA6NK02 468 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 SEMA3EO15041 775 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 PPIP5K2O43314 1243 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 GNAT2P19087 354 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 TDO2P48775 406 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 TUBB4BP68371 445 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 FILIP1LQ4L180 1135 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 CDKAL1Q5VV42 579 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 RASGRP2Q7LDG7 609 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
DDB1-224ENST00000545894 FANCBQ8NB91 859 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 CPLX3Q8WVH0 158 aa12.98□□□□□ -0.33
DDB1-224ENST00000545894 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
DDB1-224ENST00000545894 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
DDB1-224ENST00000545894 AFMP43652 599 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 STX17P56962 302 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 CAVIN4Q5BKX8 364 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 SH3RF1Q7Z6J0 888 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 NUP133Q8WUM0 1156 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 EXOC4Q96A65 974 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 CCDC51Q96ER9 411 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 PAGE5Q96GU1 130 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 ANKZF1Q9H8Y5 726 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 PUF60Q9UHX1 559 aaKnown RBP12.97□□□□□ -0.33
DDB1-224ENST00000545894 UTRNP46939 3433 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 MYO5AQ9Y4I1 1855 aaKnown RBP12.97□□□□□ -0.33
DDB1-224ENST00000545894 A0A087X0B3 334 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 PRKAB2O43741 272 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 USP5P45974 858 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 ZNF569Q5MCW4 686 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 MSANTD4Q8NCY6 345 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 GSDMAQ96QA5 445 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 RNF26Q9BY78 433 aaPredicted RBP12.97□□□□□ -0.33
DDB1-224ENST00000545894 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
DDB1-224ENST00000545894 PSD3Q9NYI0 1048 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 RAB21Q9UL25 225 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
DDB1-224ENST00000545894 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 COL4A5P29400 1685 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 A0A0U1RQJ8 604 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 CTAGE9A4FU28 777 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 H3BQF6 201 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 XBP1P17861 261 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 CASP14P31944 242 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 RASGRF1Q13972 1273 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 KIF4BQ2VIQ3 1234 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 ZNF804AQ7Z570 1209 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 ATRIPQ8WXE1 791 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 EPSTI1Q96J88 318 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 DBNDD1Q9H9R9 158 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 CD209Q9NNX6 404 aa12.96□□□□□ -0.33
DDB1-224ENST00000545894 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.33
DDB1-224ENST00000545894 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
DDB1-224ENST00000545894 ERLIN1O75477 346 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 BMP15O95972 392 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 FECHP22830 423 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 AKAP17AQ02040 695 aaKnown RBP12.96□□□□□ -0.34
DDB1-224ENST00000545894 RAD51AP2Q09MP3 1159 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 DPYDQ12882 1025 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 BEND6Q5SZJ8 279 aaPredicted RBP12.96□□□□□ -0.34
DDB1-224ENST00000545894 HDXQ7Z353 690 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 LCORLQ8N3X6 602 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 FERMT2Q96AC1 680 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 COA1Q9GZY4 146 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 TSPYL1Q9H0U9 437 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 ADAM21Q9UKJ8 722 aa12.96□□□□□ -0.34
DDB1-224ENST00000545894 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 GYPCP04921 128 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 CAPN2P17655 700 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 KRT2P35908 639 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 PPP2R5BQ15173 497 aa12.95□□□□□ -0.34
DDB1-224ENST00000545894 MSL3Q8N5Y2 521 aaKnown RBP12.95□□□□□ -0.34
DDB1-224ENST00000545894 SYMPKQ92797 1274 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms