RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 RIOX2Q8IUF8 465 aa22.42■■□□□ 1.18
DDX55-211ENST00000544429 KIFC2Q96AC6 838 aa22.42■■□□□ 1.18
DDX55-211ENST00000544429 COA7Q96BR5 231 aa22.42■■□□□ 1.18
DDX55-211ENST00000544429 ABHD8Q96I13 439 aa22.42■■□□□ 1.18
DDX55-211ENST00000544429 PRC1O43663 620 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 ZKSCAN1P17029 563 aaPredicted RBP22.41■■□□□ 1.18
DDX55-211ENST00000544429 FLT3LGP49771 235 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 OAZ1P54368 228 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 EXOSC10Q01780 885 aaKnown RBP22.41■■□□□ 1.18
DDX55-211ENST00000544429 SART3Q15020 963 aaKnown RBP22.41■■□□□ 1.18
DDX55-211ENST00000544429 MORN1Q5T089 497 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 GPATCH4Q5T3I0 446 aaKnown RBP22.41■■□□□ 1.18
DDX55-211ENST00000544429 TTBK2Q6IQ55 1244 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 TMEM87BQ96K49 555 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 NEK1Q96PY6 1258 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 LY9Q9HBG7 655 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 PRR12Q9ULL5 1215 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 SNX14Q9Y5W7 946 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 SMCHD1A6NHR9 2005 aa22.41■■□□□ 1.18
DDX55-211ENST00000544429 BRCA2P51587 3418 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 ZNF536O15090 1300 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 TROAPQ12815 778 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 CCDC96Q2M329 555 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 PLEKHH3Q7Z736 793 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 ARMC5Q96C12 935 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 CHMP4CQ96CF2 233 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 MROH8Q9H579 483 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 GPHNQ9NQX3 736 aaPredicted RBP22.4■■□□□ 1.18
DDX55-211ENST00000544429 MTMR7Q9Y216 660 aa22.4■■□□□ 1.18
DDX55-211ENST00000544429 FRMPD2Q68DX3 1309 aaPredicted RBP22.39■■□□□ 1.18
DDX55-211ENST00000544429 ERICH2A1L162 156 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 SH2B2O14492 632 aaPredicted RBP22.39■■□□□ 1.17
DDX55-211ENST00000544429 SLC25A27O95847 323 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 ERCC3P19447 782 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 STAT3P40763 770 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 LIFRP42702 1097 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 WTAPQ15007 396 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 ASPRV1Q53RT3 343 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 TMEM67Q5HYA8 995 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 SAMD1Q6SPF0 538 aaPredicted RBP22.39■■□□□ 1.17
DDX55-211ENST00000544429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.39■■□□□ 1.17
DDX55-211ENST00000544429 SOCS4Q8WXH5 440 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 TEX13BQ9BXU2 312 aa22.39■■□□□ 1.17
DDX55-211ENST00000544429 ZBED4O75132 1171 aa22.38■■□□□ 1.17
DDX55-211ENST00000544429 PTPREP23469 700 aa22.38■■□□□ 1.17
DDX55-211ENST00000544429 GRB14Q14449 540 aa22.38■■□□□ 1.17
DDX55-211ENST00000544429 SYDE2Q5VT97 1194 aa22.38■■□□□ 1.17
DDX55-211ENST00000544429 DHX32Q7L7V1 743 aaKnown RBP22.38■■□□□ 1.17
DDX55-211ENST00000544429 RANBP17Q9H2T7 1088 aaKnown RBP22.38■■□□□ 1.17
DDX55-211ENST00000544429 GPCPD1Q9NPB8 672 aa22.38■■□□□ 1.17
DDX55-211ENST00000544429 RIPK3Q9Y572 518 aa22.38■■□□□ 1.17
DDX55-211ENST00000544429 SLC15A5A6NIM6 579 aa22.37■■□□□ 1.17
DDX55-211ENST00000544429 STRNO43815 780 aa22.37■■□□□ 1.17
DDX55-211ENST00000544429 HMGB1P09429 215 aaKnown RBP22.37■■□□□ 1.17
DDX55-211ENST00000544429 XRCC5P13010 732 aaKnown RBP22.37■■□□□ 1.17
DDX55-211ENST00000544429 COPB2P35606 906 aa22.37■■□□□ 1.17
DDX55-211ENST00000544429 SLC16A2P36021 539 aa22.37■■□□□ 1.17
DDX55-211ENST00000544429 PLS1Q14651 629 aa22.37■■□□□ 1.17
DDX55-211ENST00000544429 ABRAQ8N0Z2 381 aa22.37■■□□□ 1.17
DDX55-211ENST00000544429 PXYLP1Q8TE99 480 aa22.37■■□□□ 1.17
DDX55-211ENST00000544429 PALM3A6NDB9 673 aaPredicted RBP22.36■■□□□ 1.17
DDX55-211ENST00000544429 HOXC6P09630 235 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 GOLGA8HP0CJ92 632 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 IKQ13123 557 aaPredicted RBP22.36■■□□□ 1.17
DDX55-211ENST00000544429 C8orf34Q49A92 452 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 SGMS1Q86VZ5 419 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 TMTC2Q8N394 836 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 RAET1EQ8TD07 263 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 MAP3K14Q99558 947 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 NUDT12Q9BQG2 462 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 RAVER2Q9HCJ3 691 aaKnown RBP22.36■■□□□ 1.17
DDX55-211ENST00000544429 MAD2L2Q9UI95 211 aa22.36■■□□□ 1.17
DDX55-211ENST00000544429 IGHA2P01877 340 aa22.35■■□□□ 1.17
DDX55-211ENST00000544429 PARP1P09874 1014 aaKnown RBP22.35■■□□□ 1.17
DDX55-211ENST00000544429 GRM4Q14833 912 aa22.35■■□□□ 1.17
DDX55-211ENST00000544429 SNRNP48Q6IEG0 339 aaKnown RBP22.35■■□□□ 1.17
DDX55-211ENST00000544429 CCAR1Q8IX12 1150 aaKnown RBP22.35■■□□□ 1.17
DDX55-211ENST00000544429 STAG2Q8N3U4 1231 aa22.35■■□□□ 1.17
DDX55-211ENST00000544429 FBXL16Q8N461 479 aa22.35■■□□□ 1.17
DDX55-211ENST00000544429 SLAIN1Q8ND83 568 aa22.35■■□□□ 1.17
DDX55-211ENST00000544429 IL17RAQ96F46 866 aa22.35■■□□□ 1.17
DDX55-211ENST00000544429 ISY1Q9ULR0 285 aaKnown RBP22.35■■□□□ 1.17
DDX55-211ENST00000544429 GTF3C3Q9Y5Q9 886 aa22.35■■□□□ 1.17
DDX55-211ENST00000544429 RBBP6Q7Z6E9 1792 aaKnown RBP22.35■■□□□ 1.17
DDX55-211ENST00000544429 PLXNA1Q9UIW2 1896 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 MYH6P13533 1939 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 SEC24BO95487 1268 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 GRK4P32298 578 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 MAP2K5Q13163 448 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 SLC9C1Q4G0N8 1177 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 NCAPG2Q86XI2 1143 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 ZNF654Q8IZM8 581 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 CPXCR1Q8N123 301 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 ZNF333Q96JL9 665 aa22.34■■□□□ 1.17
DDX55-211ENST00000544429 ADCY3O60266 1144 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 DDAH1O94760 285 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 ICAM1P05362 532 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 SLC35G1Q2M3R5 365 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 CATIPQ7Z7H3 387 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 AGBL1Q96MI9 1066 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms