RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 BTDP43251 543 aa16.16■□□□□ 0.18
GCFC2-211ENST00000541687 USP17L2Q6R6M4 530 aa16.16■□□□□ 0.18
GCFC2-211ENST00000541687 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
GCFC2-211ENST00000541687 ZBTB21Q9ULJ3 1066 aa16.16■□□□□ 0.18
GCFC2-211ENST00000541687 SAR1BQ9Y6B6 198 aa16.16■□□□□ 0.18
GCFC2-211ENST00000541687 ATP2C2O75185 946 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 SCNN1DP51172 638 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 CUL4BQ13620 913 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 SLC44A5Q8NCS7 719 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 IFIH1Q9BYX4 1025 aaKnown RBP16.15■□□□□ 0.18
GCFC2-211ENST00000541687 TOM1O60784 492 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 UTP14CQ5TAP6 766 aaKnown RBP16.15■□□□□ 0.18
GCFC2-211ENST00000541687 PAF1Q8N7H5 531 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 RGS22Q8NE09 1264 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 CTNNBL1Q8WYA6 563 aaPredicted RBP16.15■□□□□ 0.18
GCFC2-211ENST00000541687 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 H7C1D1 291 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 PRPF3O43395 683 aaKnown RBP16.15■□□□□ 0.18
GCFC2-211ENST00000541687 ZNF710Q8N1W2 664 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 EPB41L4AQ9HCS5 686 aaPredicted RBP16.15■□□□□ 0.18
GCFC2-211ENST00000541687 ZYXQ15942 572 aaKnown RBP16.15■□□□□ 0.18
GCFC2-211ENST00000541687 PARD6BQ9BYG5 372 aa16.15■□□□□ 0.18
GCFC2-211ENST00000541687 TRIM49BA6NDI0 452 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 KCNQ2O43526 872 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 CCDC65Q8IXS2 484 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 TUBGCP2Q9BSJ2 902 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 SLC1A4P43007 532 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 GYS2P54840 703 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 CYP27A1Q02318 531 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 FMR1Q06787 632 aaKnown RBP eCLIP16.14■□□□□ 0.17
GCFC2-211ENST00000541687 LRRC41Q15345 812 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 NCAPH2Q6IBW4 605 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 NEK8Q86SG6 692 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 PDE11AQ9HCR9 933 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 CDC23Q9UJX2 597 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 PP2D1A8MPX8 630 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 SGMS1Q86VZ5 419 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 PHLPP2Q6ZVD8 1323 aa16.14■□□□□ 0.17
GCFC2-211ENST00000541687 VAV2P52735 878 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 MAP2K1Q02750 393 aaPredicted RBP16.13■□□□□ 0.17
GCFC2-211ENST00000541687 TNIP1Q15025 636 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 KRT31Q15323 416 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 SND1Q7KZF4 910 aaKnown RBP eCLIP16.13■□□□□ 0.17
GCFC2-211ENST00000541687 MAEAQ7L5Y9 396 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 NBPF11Q86T75 865 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 TICAM2Q86XR7 235 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 CCDC51Q96ER9 411 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 CDHR2Q9BYE9 1310 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 MEGF6O75095 1541 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 TMEM110-MUSTN1A8MSY1 372 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 BUB1O43683 1085 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 CSF1RP07333 972 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 LONP1P36776 959 aaKnown RBP16.13■□□□□ 0.17
GCFC2-211ENST00000541687 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
GCFC2-211ENST00000541687 CPDO75976 1380 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 DNM2P50570 870 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 DPP8Q6V1X1 898 aaPredicted RBP16.13■□□□□ 0.17
GCFC2-211ENST00000541687 MINPP1Q9UNW1 487 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.13■□□□□ 0.17
GCFC2-211ENST00000541687 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
GCFC2-211ENST00000541687 SRGAP1Q7Z6B7 1085 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 VEZTQ9HBM0 779 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 ST7Q9NRC1 585 aa16.13■□□□□ 0.17
GCFC2-211ENST00000541687 FAM13AO94988 1023 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 LONRF2Q1L5Z9 754 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 C8orf74Q6P047 294 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 TMTC3Q6ZXV5 915 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 RBM17Q96I25 401 aaKnown RBP16.12■□□□□ 0.17
GCFC2-211ENST00000541687 CNOT6LQ96LI5 555 aaKnown RBP16.12■□□□□ 0.17
GCFC2-211ENST00000541687 NUP58Q9BVL2 599 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 DDX41Q9UJV9 622 aaKnown RBP16.12■□□□□ 0.17
GCFC2-211ENST00000541687 PCDHA4Q9UN74 947 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 KDM6AO15550 1401 aaPredicted RBP16.12■□□□□ 0.17
GCFC2-211ENST00000541687 GSTTP1A0A1W2PQM5 241 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 DOK7Q18PE1 504 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 COA7Q96BR5 231 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 WDR24Q96S15 920 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 ZCCHC17Q9NP64 241 aaKnown RBP16.12■□□□□ 0.17
GCFC2-211ENST00000541687 SMIM23A6NLE4 172 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 PNMA6AP0CW24 399 aaPredicted RBP16.12■□□□□ 0.17
GCFC2-211ENST00000541687 MNAT1P51948 309 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 MRPS25P82663 173 aaKnown RBP16.12■□□□□ 0.17
GCFC2-211ENST00000541687 CETN1Q12798 172 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 RABGGTAQ92696 567 aa16.12■□□□□ 0.17
GCFC2-211ENST00000541687 RIMS1Q86UR5 1692 aaKnown RBP16.12■□□□□ 0.17
GCFC2-211ENST00000541687 KLHL7Q8IXQ5 586 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 BBXQ8WY36 941 aaPredicted RBP16.11■□□□□ 0.17
GCFC2-211ENST00000541687 PIGSQ96S52 555 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 BPIFA3Q9BQP9 254 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 RIMBP3Q9UFD9 1639 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 SLC16A2P36021 539 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 TBCKQ8TEA7 893 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 USP40Q9NVE5 1235 aa16.11■□□□□ 0.17
GCFC2-211ENST00000541687 FBXO2Q9UK22 296 aaPredicted RBP16.11■□□□□ 0.17
GCFC2-211ENST00000541687 CETN3O15182 167 aa16.1■□□□□ 0.17
GCFC2-211ENST00000541687 CASP7P55210 303 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 219.4 ms