RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 SNX17Q15036 470 aa20.58■□□□□ 0.89
PDCD2-207ENST00000539212 CCDC129Q6ZRS4 1044 aa20.58■□□□□ 0.89
PDCD2-207ENST00000539212 SH3RF1Q7Z6J0 888 aa20.58■□□□□ 0.89
PDCD2-207ENST00000539212 KIFC2Q96AC6 838 aa20.58■□□□□ 0.89
PDCD2-207ENST00000539212 RAVER2Q9HCJ3 691 aaKnown RBP20.58■□□□□ 0.89
PDCD2-207ENST00000539212 LRRC37A2A6NM11 1700 aa20.58■□□□□ 0.88
PDCD2-207ENST00000539212 RARBP10826 455 aa20.57■□□□□ 0.88
PDCD2-207ENST00000539212 GPR153Q6NV75 609 aa20.57■□□□□ 0.88
PDCD2-207ENST00000539212 ZNF444Q8N0Y2 327 aaPredicted RBP20.57■□□□□ 0.88
PDCD2-207ENST00000539212 PDLIM7Q9NR12 457 aa20.57■□□□□ 0.88
PDCD2-207ENST00000539212 MTMR4Q9NYA4 1195 aa20.57■□□□□ 0.88
PDCD2-207ENST00000539212 PRKAG2Q9UGJ0 569 aa20.57■□□□□ 0.88
PDCD2-207ENST00000539212 PLIN4Q96Q06 1357 aa20.57■□□□□ 0.88
PDCD2-207ENST00000539212 LCTP09848 1927 aa20.57■□□□□ 0.88
PDCD2-207ENST00000539212 EYSQ5T1H1 3165 aa20.56■□□□□ 0.88
PDCD2-207ENST00000539212 FOXP2O15409 715 aa20.56■□□□□ 0.88
PDCD2-207ENST00000539212 ZMYM1Q5SVZ6 1142 aa20.56■□□□□ 0.88
PDCD2-207ENST00000539212 SLC17A8Q8NDX2 589 aa20.56■□□□□ 0.88
PDCD2-207ENST00000539212 DIS3Q9Y2L1 958 aaKnown RBP20.56■□□□□ 0.88
PDCD2-207ENST00000539212 SALL3Q9BXA9 1300 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 TRIM43BA6NCK2 446 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 ERC2O15083 957 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 MX1P20591 662 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 COPB2P35606 906 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 IRX5P78411 483 aaPredicted RBP20.55■□□□□ 0.88
PDCD2-207ENST00000539212 PPARAQ07869 468 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 C9orf50Q5SZB4 431 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 RASGRP2Q7LDG7 609 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 PRPF38AQ8NAV1 312 aaKnown RBP20.55■□□□□ 0.88
PDCD2-207ENST00000539212 BADQ92934 168 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 MKL1Q969V6 931 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 TRIM43Q96BQ3 446 aaPredicted RBP20.55■□□□□ 0.88
PDCD2-207ENST00000539212 FGD4Q96M96 766 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 NAPBQ9H115 298 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 INCENPQ9NQS7 918 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 MTMR10Q9NXD2 777 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 NRBP1Q9UHY1 535 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 PHF24Q9UPV7 400 aa20.55■□□□□ 0.88
PDCD2-207ENST00000539212 UNC80Q8N2C7 3258 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 SNAI1O95863 264 aaPredicted RBP20.54■□□□□ 0.88
PDCD2-207ENST00000539212 TTLL1O95922 423 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 TSPY3P0CV98 308 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 TSPY8P0CW00 308 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 AKR1A1P14550 325 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 RRP1P56182 461 aaKnown RBP20.54■□□□□ 0.88
PDCD2-207ENST00000539212 SLFN13Q68D06 897 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 NEDD1Q8NHV4 660 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 DDX11Q96FC9 970 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 NACAP1Q9BZK3 213 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 SLC38A10Q9HBR0 1119 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 ZHX1Q9UKY1 873 aaPredicted RBP20.54■□□□□ 0.88
PDCD2-207ENST00000539212 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
PDCD2-207ENST00000539212 CNPY2Q9Y2B0 182 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 TACC3Q9Y6A5 838 aa20.54■□□□□ 0.88
PDCD2-207ENST00000539212 SYNRGQ9UMZ2 1314 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 DNAJC25-GNG10A0A024R161 153 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 A0A1W2PQ45 241 aaPredicted RBP20.53■□□□□ 0.88
PDCD2-207ENST00000539212 A0A1W2PQY0 241 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 MYADML2A6NDP7 307 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 ZBED4O75132 1171 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 ADAMTS4O75173 837 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 ITGB8P26012 769 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 TFAP4Q01664 338 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 TLE2Q04725 743 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 CTDSPL2Q05D32 466 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 SHHQ15465 462 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 GMCL1P1Q8NEA9 526 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 FAM161BQ96MY7 647 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 CRBNQ96SW2 442 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 ZNF287Q9HBT7 754 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 HOMER2Q9NSB8 354 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 FEM1BQ9UK73 627 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 CTDP1Q9Y5B0 961 aaPredicted RBP20.53■□□□□ 0.88
PDCD2-207ENST00000539212 CDH23Q9H251 3354 aa20.53■□□□□ 0.88
PDCD2-207ENST00000539212 ATP2A1O14983 1001 aa20.52■□□□□ 0.88
PDCD2-207ENST00000539212 ADCY6O43306 1168 aa20.52■□□□□ 0.88
PDCD2-207ENST00000539212 NMT2O60551 498 aa20.52■□□□□ 0.88
PDCD2-207ENST00000539212 BMP3P12645 472 aa20.52■□□□□ 0.88
PDCD2-207ENST00000539212 PDE4BQ07343 736 aa20.52■□□□□ 0.88
PDCD2-207ENST00000539212 LRRFIP1Q32MZ4 808 aaKnown RBP20.52■□□□□ 0.88
PDCD2-207ENST00000539212 VPS53Q5VIR6 699 aa20.52■□□□□ 0.88
PDCD2-207ENST00000539212 RNF180Q86T96 592 aa20.52■□□□□ 0.88
PDCD2-207ENST00000539212 TMEM232C9JQI7 657 aa20.51■□□□□ 0.87
PDCD2-207ENST00000539212 PQBP1O60828 265 aaKnown RBP20.51■□□□□ 0.87
PDCD2-207ENST00000539212 C1orf53Q5VUE5 145 aa20.51■□□□□ 0.87
PDCD2-207ENST00000539212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDCD2-207ENST00000539212 SYNGAP1Q96PV0 1343 aa20.51■□□□□ 0.87
PDCD2-207ENST00000539212 SNAP25P60880 206 aa20.5■□□□□ 0.87
PDCD2-207ENST00000539212 MAMDC4Q6UXC1 1216 aa20.5■□□□□ 0.87
PDCD2-207ENST00000539212 ANKRD35Q8N283 1001 aa20.5■□□□□ 0.87
PDCD2-207ENST00000539212 GUCD1Q96NT3 240 aa20.5■□□□□ 0.87
PDCD2-207ENST00000539212 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.5■□□□□ 0.87
PDCD2-207ENST00000539212 STXBP5LQ9Y2K9 1186 aa20.5■□□□□ 0.87
PDCD2-207ENST00000539212 CLTBP09497 229 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 EPHB4P54760 987 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 CNTN2Q02246 1040 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 ANKRD45Q5TZF3 282 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 AGBL1Q96MI9 1066 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 IL17RBQ9NRM6 502 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 FAM184BQ9ULE4 1060 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms