RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 FUT2Q10981 343 aa28.18■■■□□ 2.1
HMGA2-207ENST00000537275 SLC35G1Q2M3R5 365 aa28.18■■■□□ 2.1
HMGA2-207ENST00000537275 ANKRD23Q86SG2 305 aa28.18■■■□□ 2.1
HMGA2-207ENST00000537275 FAM160B2Q86V87 743 aa28.18■■■□□ 2.1
HMGA2-207ENST00000537275 WDR33Q9C0J8 1336 aaKnown RBP28.18■■■□□ 2.1
HMGA2-207ENST00000537275 CYTH3O43739 400 aa28.18■■■□□ 2.1
HMGA2-207ENST00000537275 VEGFBP49765 207 aa28.18■■■□□ 2.1
HMGA2-207ENST00000537275 KIF23Q02241 960 aaPredicted RBP28.18■■■□□ 2.1
HMGA2-207ENST00000537275 IKQ13123 557 aaPredicted RBP28.18■■■□□ 2.1
HMGA2-207ENST00000537275 PABPC4Q13310 644 aaKnown RBP eCLIP28.18■■■□□ 2.1
HMGA2-207ENST00000537275 CUL4AQ13619 759 aa28.18■■■□□ 2.1
HMGA2-207ENST00000537275 SLC45A1Q9Y2W3 748 aa28.18■■■□□ 2.1
HMGA2-207ENST00000537275 CPLX1O14810 134 aa28.17■■■□□ 2.1
HMGA2-207ENST00000537275 FLOT1O75955 427 aa28.17■■■□□ 2.1
HMGA2-207ENST00000537275 IFNAR1P17181 557 aa28.17■■■□□ 2.1
HMGA2-207ENST00000537275 ANP32AP39687 249 aaKnown RBP28.17■■■□□ 2.1
HMGA2-207ENST00000537275 SREBF2Q12772 1141 aa28.17■■■□□ 2.1
HMGA2-207ENST00000537275 SAMD1Q6SPF0 538 aaPredicted RBP28.17■■■□□ 2.1
HMGA2-207ENST00000537275 CCDC82Q8N4S0 544 aa28.17■■■□□ 2.1
HMGA2-207ENST00000537275 SPZ1Q9BXG8 430 aa28.17■■■□□ 2.1
HMGA2-207ENST00000537275 RIOX1Q9H6W3 641 aa28.17■■■□□ 2.1
HMGA2-207ENST00000537275 PARP14Q460N5 1801 aa28.17■■■□□ 2.1
HMGA2-207ENST00000537275 RLFQ13129 1914 aa28.16■■■□□ 2.1
HMGA2-207ENST00000537275 CTDNEP1O95476 244 aa28.16■■■□□ 2.1
HMGA2-207ENST00000537275 TM4SF4P48230 202 aa28.16■■■□□ 2.1
HMGA2-207ENST00000537275 COG2Q14746 738 aa28.16■■■□□ 2.1
HMGA2-207ENST00000537275 CPLX2Q6PUV4 134 aaKnown RBP28.16■■■□□ 2.1
HMGA2-207ENST00000537275 FAM43AQ8N2R8 423 aa28.16■■■□□ 2.1
HMGA2-207ENST00000537275 PRPF38AQ8NAV1 312 aaKnown RBP28.16■■■□□ 2.1
HMGA2-207ENST00000537275 SLF1Q9BQI6 1058 aa28.16■■■□□ 2.1
HMGA2-207ENST00000537275 PPP1R9AQ9ULJ8 1098 aa28.16■■■□□ 2.1
HMGA2-207ENST00000537275 PRR12Q9ULL5 1215 aa28.16■■■□□ 2.1
HMGA2-207ENST00000537275 BECN1Q14457 450 aa28.15■■■□□ 2.1
HMGA2-207ENST00000537275 SYDE2Q5VT97 1194 aa28.15■■■□□ 2.1
HMGA2-207ENST00000537275 ADGRF4Q8IZF3 695 aa28.15■■■□□ 2.1
HMGA2-207ENST00000537275 PDHXO00330 501 aa28.14■■■□□ 2.1
HMGA2-207ENST00000537275 IGF2BP3O00425 579 aaKnown RBP eCLIP28.14■■■□□ 2.13e-6■■■□□ 17.3
HMGA2-207ENST00000537275 DSG3P32926 999 aa28.14■■■□□ 2.1
HMGA2-207ENST00000537275 MYPNQ86TC9 1320 aa28.14■■■□□ 2.1
HMGA2-207ENST00000537275 CNTNAP5Q8WYK1 1306 aa28.14■■■□□ 2.1
HMGA2-207ENST00000537275 KIFC2Q96AC6 838 aa28.14■■■□□ 2.1
HMGA2-207ENST00000537275 LLPHQ9BRT6 129 aaKnown RBP28.14■■■□□ 2.1
HMGA2-207ENST00000537275 ASCC2Q9H1I8 757 aaPredicted RBP28.14■■■□□ 2.1
HMGA2-207ENST00000537275 JMJD4Q9H9V9 463 aa28.14■■■□□ 2.1
HMGA2-207ENST00000537275 HOXC10Q9NYD6 342 aa28.14■■■□□ 2.1
HMGA2-207ENST00000537275 OSBPP22059 807 aa28.13■■■□□ 2.09
HMGA2-207ENST00000537275 IRX3P78415 501 aaPredicted RBP28.13■■■□□ 2.09
HMGA2-207ENST00000537275 NSUN7Q8NE18 718 aaKnown RBP28.13■■■□□ 2.09
HMGA2-207ENST00000537275 ZCCHC17Q9NP64 241 aaKnown RBP28.13■■■□□ 2.09
HMGA2-207ENST00000537275 CDKL5O76039 1030 aa28.13■■■□□ 2.09
HMGA2-207ENST00000537275 IFNL1Q8IU54 200 aa28.13■■■□□ 2.09
HMGA2-207ENST00000537275 PHKBQ93100 1093 aa28.13■■■□□ 2.09
HMGA2-207ENST00000537275 MTMR8Q96EF0 704 aa28.13■■■□□ 2.09
HMGA2-207ENST00000537275 VAT1LQ9HCJ6 419 aa28.13■■■□□ 2.09
HMGA2-207ENST00000537275 PNMA3Q9UL41 463 aa28.13■■■□□ 2.09
HMGA2-207ENST00000537275 ADAMTS5Q9UNA0 930 aa28.13■■■□□ 2.09
HMGA2-207ENST00000537275 MAP2K2P36507 400 aa28.12■■■□□ 2.09
HMGA2-207ENST00000537275 OTUD7BQ6GQQ9 843 aa28.12■■■□□ 2.09
HMGA2-207ENST00000537275 REM2Q8IYK8 340 aaPredicted RBP28.12■■■□□ 2.09
HMGA2-207ENST00000537275 P2RX7Q99572 595 aaKnown RBP28.12■■■□□ 2.09
HMGA2-207ENST00000537275 RNF26Q9BY78 433 aaPredicted RBP28.12■■■□□ 2.09
HMGA2-207ENST00000537275 SPDYE16A6NNV3 312 aaPredicted RBP28.11■■■□□ 2.09
HMGA2-207ENST00000537275 DTNBO60941 627 aa28.11■■■□□ 2.09
HMGA2-207ENST00000537275 SMARCC2Q8TAQ2 1214 aa28.11■■■□□ 2.09
HMGA2-207ENST00000537275 ATG4CQ96DT6 458 aa28.11■■■□□ 2.09
HMGA2-207ENST00000537275 BAZ2BQ9UIF8 2168 aaKnown RBP28.11■■■□□ 2.09
HMGA2-207ENST00000537275 PRPF3O43395 683 aaKnown RBP28.1■■■□□ 2.09
HMGA2-207ENST00000537275 PPFIA3O75145 1194 aa28.1■■■□□ 2.09
HMGA2-207ENST00000537275 FMNL1O95466 1100 aaPredicted RBP28.1■■■□□ 2.09
HMGA2-207ENST00000537275 FDX1P10109 184 aa28.1■■■□□ 2.09
HMGA2-207ENST00000537275 HERVK_113P62684 666 aa28.1■■■□□ 2.09
HMGA2-207ENST00000537275 LBX2Q6XYB7 198 aa28.1■■■□□ 2.09
HMGA2-207ENST00000537275 INTS4Q96HW7 963 aaKnown RBP28.1■■■□□ 2.09
HMGA2-207ENST00000537275 SLC26A6Q9BXS9 759 aa28.1■■■□□ 2.09
HMGA2-207ENST00000537275 RANBP17Q9H2T7 1088 aaKnown RBP28.1■■■□□ 2.09
HMGA2-207ENST00000537275 V9GY48 417 aaPredicted RBP28.1■■■□□ 2.09
HMGA2-207ENST00000537275 PTPDC1A2A3K4 754 aa28.09■■■□□ 2.09
HMGA2-207ENST00000537275 VWA5AO00534 786 aa28.09■■■□□ 2.09
HMGA2-207ENST00000537275 JAK2O60674 1132 aa28.09■■■□□ 2.09
HMGA2-207ENST00000537275 SSRP1Q08945 709 aaKnown RBP28.09■■■□□ 2.09
HMGA2-207ENST00000537275 PIGSQ96S52 555 aa28.09■■■□□ 2.09
HMGA2-207ENST00000537275 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.09■■■□□ 2.09
HMGA2-207ENST00000537275 CYP2C8P10632 490 aa28.08■■■□□ 2.09
HMGA2-207ENST00000537275 POTEEQ6S8J3 1075 aa28.08■■■□□ 2.09
HMGA2-207ENST00000537275 TRIM22Q8IYM9 498 aa28.08■■■□□ 2.09
HMGA2-207ENST00000537275 RRP36Q96EU6 259 aaKnown RBP28.08■■■□□ 2.09
HMGA2-207ENST00000537275 SLC38A10Q9HBR0 1119 aa28.08■■■□□ 2.09
HMGA2-207ENST00000537275 STK36Q9NRP7 1315 aa28.08■■■□□ 2.09
HMGA2-207ENST00000537275 THSD7BQ9C0I4 1608 aa28.08■■■□□ 2.09
HMGA2-207ENST00000537275 SNAP25P60880 206 aa28.08■■■□□ 2.08
HMGA2-207ENST00000537275 HOMER1Q86YM7 354 aa28.08■■■□□ 2.08
HMGA2-207ENST00000537275 PIBF1Q8WXW3 757 aa28.08■■■□□ 2.08
HMGA2-207ENST00000537275 RBM27Q9P2N5 1060 aaKnown RBP28.08■■■□□ 2.08
HMGA2-207ENST00000537275 hCG_1642624A0A1W2PR95 340 aa28.07■■■□□ 2.08
HMGA2-207ENST00000537275 ZBTB5O15062 677 aa28.07■■■□□ 2.08
HMGA2-207ENST00000537275 FDPSP14324 419 aaKnown RBP28.07■■■□□ 2.08
HMGA2-207ENST00000537275 CDC37Q16543 378 aaPredicted RBP28.07■■■□□ 2.08
HMGA2-207ENST00000537275 REPS2Q8NFH8 660 aa28.07■■■□□ 2.08
HMGA2-207ENST00000537275 PARK7Q99497 189 aaKnown RBP28.07■■■□□ 2.08
HMGA2-207ENST00000537275 A0A0G2JMZ2 1700 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms